| Literature DB >> 28971099 |
Doris M Jacobs1, Lotte Smolders2, Yuguang Lin1, Niels de Roo1, Elke A Trautwein1, John van Duynhoven1,3, Ronald P Mensink2, Jogchum Plat2, Velitchka V Mihaleva1.
Abstract
Scope: Theobromine is a major active compound in cocoa with allegedly beneficial effect on high-density-lipoprotein-cholesterol (HDL-CH). We have investigated the effect of theobromine (TB) consumption on the concentrations of triglyceride (TG) and cholesterol (CH) in various lipoprotein (LP) subclasses.Entities:
Keywords: HDL; NMR; PLS model; lipoprotein; theobromine
Year: 2017 PMID: 28971099 PMCID: PMC5609577 DOI: 10.3389/fmolb.2017.00059
Source DB: PubMed Journal: Front Mol Biosci ISSN: 2296-889X
Summary of the statistically significant (p < 0.001) PLS models of cholesterol (CH) concentrations showing the number of latent variables (#LV), Q2, the correlation coefficient (R), the root-mean-square error (RMSE), and the coefficient of variation (CV) for the test and training sets, respectively.
| CM01 | 5 | 0.72 | 0.86 | 1.28 | 37.66 | 0.71 | 0.85 | 1.52 | 44.56 |
| CM02 | 9 | 0.81 | 0.91 | 0.47 | 23.97 | 0.81 | 0.90 | 0.64 | 30.39 |
| VLDL03 | 6 | 0.82 | 0.91 | 0.97 | 17.12 | 0.80 | 0.90 | 1.38 | 22.39 |
| VLDL04 | 5 | 0.89 | 0.95 | 1.05 | 13.59 | 0.86 | 0.93 | 1.55 | 17.78 |
| VLDL05 | 6 | 0.76 | 0.88 | 2.57 | 12.51 | 0.79 | 0.89 | 3.24 | 14.35 |
| VLDL06 | 11 | 0.61 | 0.84 | 1.91 | 19.50 | 0.74 | 0.86 | 2.11 | 18.59 |
| VLDL07 | 10 | 0.42 | 0.75 | 1.41 | 18.77 | 0.75 | 0.87 | 1.34 | 15.95 |
| LDL08 | 11 | 0.55 | 0.80 | 3.82 | 12.57 | 0.76 | 0.87 | 4.31 | 14.19 |
| LDL09 | 10 | 0.78 | 0.89 | 4.25 | 7.97 | 0.91 | 0.95 | 4.53 | 8.55 |
| LDL10 | 10 | 0.68 | 0.84 | 3.28 | 15.85 | 0.84 | 0.92 | 3.43 | 15.75 |
| LDL11 | 11 | 0.61 | 0.80 | 0.98 | 16.74 | 0.78 | 0.89 | 1.06 | 17.41 |
| HDL15 | 11 | 0.19 | 0.59 | 0.16 | 13.24 | 0.51 | 0.72 | 0.15 | 11.85 |
| HDL16 | 12 | 0.90 | 0.95 | 0.57 | 16.67 | 0.78 | 0.89 | 1.18 | 27.07 |
| HDL17 | 12 | 0.77 | 0.88 | 1.43 | 10.39 | 0.81 | 0.90 | 1.53 | 10.12 |
| HDL18 | 5 | 0.86 | 0.93 | 0.60 | 3.84 | 0.85 | 0.92 | 0.75 | 4.70 |
| VLDLtot | 10 | 0.84 | 0.93 | 5.26 | 10.27 | 0.86 | 0.93 | 6.77 | 11.82 |
| LDLtot | 11 | 0.88 | 0.94 | 6.51 | 5.84 | 0.92 | 0.96 | 8.58 | 7.62 |
| HDLtot | 12 | 0.86 | 0.93 | 2.06 | 5.19 | 0.87 | 0.94 | 2.51 | 5.88 |
Parameters calculated from 10-fold cross-validation.
RMSE in mg/dL.
Concentrations were square root transformed.
Summary of the statistically significant (p < 0.001) PLS models of triglyceride (TG) concentrations showing the number of latent variables (#LV), Q2, the correlation coefficient (R), the root-mean-square error (RMSE), and the coefficient of variation (CV) for the test and training sets, respectively.
| CM01 | 5 | 0.82 | 0.92 | 4.74 | 32.04 | 0.82 | 0.91 | 4.98 | 36.77 |
| CM02 | 6 | 0.92 | 0.96 | 1.40 | 15.23 | 0.90 | 0.96 | 1.87 | 20.72 |
| VLDL03 | 6 | 0.89 | 0.94 | 2.89 | 13.56 | 0.91 | 0.96 | 3.36 | 15.22 |
| VLDL04 | 8 | 0.86 | 0.94 | 4.03 | 13.31 | 0.93 | 0.97 | 3.65 | 11.39 |
| VLDL05 | 7 | 0.81 | 0.90 | 3.96 | 13.20 | 0.87 | 0.94 | 4.16 | 12.85 |
| VLDL06 | 6 | 0.75 | 0.87 | 2.01 | 16.19 | 0.80 | 0.89 | 2.25 | 16.44 |
| VLDL07 | 6 | 0.87 | 0.93 | 0.56 | 10.41 | 0.86 | 0.93 | 0.75 | 12.49 |
| LDL08 | 9 | 0.87 | 0.95 | 0.76 | 8.43 | 0.90 | 0.95 | 0.92 | 9.40 |
| LDL09 | 7 | 0.86 | 0.94 | 0.82 | 9.10 | 0.93 | 0.96 | 0.76 | 7.92 |
| LDL10 | 7 | 0.81 | 0.91 | 0.46 | 13.02 | 0.86 | 0.93 | 0.48 | 12.71 |
| LDL11 | 7 | 0.81 | 0.91 | 0.16 | 13.48 | 0.86 | 0.93 | 0.17 | 13.24 |
| HDL15 | 11 | 0.11 | 0.38 | 0.27 | 56.31 | 0.63 | 0.80 | 0.12 | 24.47 |
| HDL16 | 11 | 0.50 | 0.71 | 0.52 | 34.30 | 0.78 | 0.88 | 0.55 | 29.05 |
| HDL17 | 8 | 0.76 | 0.91 | 0.58 | 13.00 | 0.72 | 0.86 | 0.83 | 16.86 |
| HDL18 | 8 | 0.64 | 0.82 | 0.61 | 16.04 | 0.55 | 0.75 | 0.80 | 20.10 |
| VLDLtot | 7 | 0.89 | 0.95 | 10.65 | 10.72 | 0.94 | 0.97 | 9.74 | 9.18 |
| LDLtot | 7 | 0.90 | 0.96 | 1.80 | 7.69 | 0.94 | 0.97 | 1.76 | 7.00 |
| HDLtot | 9 | 0.73 | 0.86 | 1.63 | 13.03 | 0.75 | 0.87 | 2.05 | 14.98 |
Parameters calculated from 10-fold cross-validation.
RMSE in mg/dL.
Concentrations were square root transformed.
Figure 1Lipoprotein profiles of two study cohorts. Mean concentrations of cholesterol (CH) (A) and triglycerides (TG) (B) in the LP subclasses in 122 subjects from the TB cohort (black curve) and in 290 subjects from the Mihaleva cohort (red curve). The concentrations were measured in mg/dL by LipoSEARCH. The error bars indicate standard deviations.
Figure 2Comparison between predicted and measured CH and TG concentrations in different lipoprotein subclasses. Predicted (pred) versus measured (obs) CH (upper rows) and TG (lower rows) concentrations (in mg/dL) in the VLDL (A), LDL (B), and HDL (C) subclasses. The concentrations were predicted from the diffusion-edited 1H NMR spectra of the test set samples of the TB study using the TB model (black circles) and the Mihaleva model (red crosses), respectively. The measured concentrations were from the 42 test set samples of the TB study. The green line shows the ideal correlation between the predicted and measured concentrations.
The effect of theobromine (TB) and placebo treatments on serum cholesterol (CH) concentrations in total lipoproteins and 15 lipoprotein subclasses.
| CM01-CH | placebo | 0.076 | 0.008 | ||
| TB | 0.089 | 0.008 | 16.19 | 0.09 | |
| CM02-CH | placebo | 0.047 | 0.004 | ||
| TB | 0.054 | 0.004 | 13.50 | 0.08 | |
| VLDL03-CH | placebo | 0.148 | 0.008 | ||
| TB | 0.157 | 0.008 | 6.41 | 0.15 | |
| VLDL04-CH | placebo | 0.213 | 0.010 | ||
| TB | 0.219 | 0.010 | 2.81 | 0.44 | |
| VLDL05-CH | placebo | 0.573 | 0.011 | ||
| TB | 0.565 | 0.010 | −1.53 | 0.32 | |
| VLDL06-CH | placebo | 0.282 | 0.007 | ||
| TB | 0.277 | 0.007 | −1.81 | 0.45 | |
| VLDL07-CH | placebo | 0.221 | 0.006 | ||
| TB | 0.217 | 0.006 | −1.79 | 0.32 | |
| LDL08-CH | placebo | 0.823 | 0.018 | ||
| TB | 0.793 | 0.018 | −3.64 | ||
| LDL09-CH | placebo | 1.424 | 0.038 | ||
| TB | 1.346 | 0.038 | −5.48 | ||
| LDL10-CH | placebo | 0.571 | 0.016 | ||
| TB | 0.532 | 0.016 | −6.79 | ||
| LDL11-CH | placebo | 0.159 | 0.005 | ||
| TB | 0.150 | 0.005 | −5.68 | ||
| HDL15-CH | placebo | 0.034 | 0.001 | ||
| TB | 0.034 | 0.001 | −0.05 | 0.97 | |
| HDL16-CH | placebo | 0.106 | 0.006 | ||
| TB | 0.110 | 0.006 | 4.59 | 0.33 | |
| HDL17-CH | placebo | 0.396 | 0.011 | ||
| TB | 0.401 | 0.011 | 1.37 | 0.41 | |
| HDL18-CH | placebo | 0.421 | 0.005 | ||
| TB | 0.419 | 0.005 | −0.47 | 0.61 | |
| VLDLtot-CH | placebo | 1.421 | 0.033 | ||
| TB | 1.422 | 0.033 | 0.06 | 0.97 | |
| LDLtot-CH | placebo | 3.017 | 0.081 | ||
| TB | 2.859 | 0.081 | −5.24 | ||
| HDLtot-CH | placebo | 1.114 | 0.021 | ||
| TB | 1.126 | 0.021 | 1.04 | 0.35 |
Least Squares (LS)Means and Standard Errors were corrected for baseline, gender, age, body mass index, and two visits.
p-value of Diff LSMeans TB vs. placebo; values in bold are statistically significant.
The effect of theobromine (TB) and placebo treatments on serum triglyceride (TG) concentrations in total lipoproteins and 15 lipoprotein subclasses.
| CM01-TG | placebo | 0.136 | 0.017 | ||
| TB | 0.161 | 0.016 | 18.43 | 0.11 | |
| CM02-TG | placebo | 0.095 | 0.009 | ||
| TB | 0.106 | 0.009 | 11.21 | 0.17 | |
| VLDL03-TG | placebo | 0.239 | 0.018 | ||
| TB | 0.255 | 0.018 | 6.41 | 0.25 | |
| VLDL04-TG | placebo | 0.351 | 0.021 | ||
| TB | 0.361 | 0.021 | 2.73 | 0.50 | |
| VLDL05-TG | placebo | 0.357 | 0.014 | ||
| TB | 0.356 | 0.014 | −0.28 | 0.92 | |
| VLDL06-TG | placebo | 0.150 | 0.004 | ||
| TB | 0.147 | 0.004 | −1.46 | 0.54 | |
| VLDL07-TG | placebo | 0.066 | 0.002 | ||
| TB | 0.066 | 0.002 | −0.88 | 0.64 | |
| LDL08-TG | placebo | 0.111 | 0.003 | ||
| TB | 0.109 | 0.003 | −2.47 | 0.20 | |
| LDL09-TG | placebo | 0.108 | 0.002 | ||
| TB | 0.105 | 0.002 | −2.35 | 0.15 | |
| LDL10-TG | placebo | 0.042 | 0.001 | ||
| TB | 0.042 | 0.001 | −1.11 | 0.65 | |
| LDL11-TG | placebo | 0.014 | 0.000 | ||
| TB | 0.014 | 0.000 | 0.29 | 0.92 | |
| HDL15-TG | placebo | 0.005 | 0.000 | ||
| TB | 0.006 | 0.000 | 1.55 | 0.75 | |
| HDL16-TG | placebo | 0.020 | 0.001 | ||
| TB | 0.021 | 0.001 | 2.49 | 0.65 | |
| HDL17-TG | placebo | 0.056 | 0.002 | ||
| TB | 0.056 | 0.002 | 0.62 | 0.84 | |
| HDL18-TG | placebo | 0.045 | 0.001 | ||
| TB | 0.045 | 0.001 | 0.33 | 0.91 | |
| VLDLtot-TG | placebo | 1.169 | 0.057 | ||
| TB | 1.189 | 0.056 | 1.69 | 0.61 | |
| LDLtot-TG | placebo | 0.282 | 0.006 | ||
| TB | 0.279 | 0.006 | −1.22 | 0.46 | |
| HDLtot-TG | placebo | 0.156 | 0.005 | ||
| TB | 0.156 | 0.005 | 0.46 | 0.86 |
Least Squares (LS)Means and Standard Errors were corrected for baseline, gender, age, body mass index, and two visits.
p-value of Diff LSMeans TB vs. placebo; values in bold are statistically significant.