Literature DB >> 28966015

Structural Characterization of Whirlin Reveals an Unexpected and Dynamic Supramodule Conformation of Its PDZ Tandem.

Florent Delhommel1, Florence Cordier2, Benjamin Bardiaux3, Guillaume Bouvier3, Baptiste Colcombet-Cazenave2, Sébastien Brier4, Bertrand Raynal5, Sylvie Nouaille6, Amel Bahloul6, Julia Chamot-Rooke4, Michael Nilges3, Christine Petit7, Nicolas Wolff8.   

Abstract

Hearing relies on the transduction of sound-evoked vibrations into electric signals, occurring in the stereocilia bundle of hair cells. The bundle is organized in a staircase pattern formed by rows of packed stereocilia. This architecture is pivotal to transduction and involves a network of scaffolding proteins with hitherto uncharacterized features. Key interactions in this network are mediated by PDZ domains. Here, we describe the architecture of the first two PDZ domains of whirlin, a protein involved in these assemblies and associated with congenital deaf-blindness. C-terminal hairpin extensions of the PDZ domains mediate the transient supramodular assembly, which improves the binding capacity of the first domain. We determined a detailed structural model of the closed conformation of the PDZ tandem and characterized its equilibrium with an ensemble of open conformations. The structural and dynamic behavior of this PDZ tandem provides key insights into the regulatory mechanisms involved in the hearing machinery.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  NMR spectroscopy; PDZ domain; SAXS; Usher syndrome; supramodule; whirlin

Mesh:

Substances:

Year:  2017        PMID: 28966015     DOI: 10.1016/j.str.2017.08.013

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  9 in total

1.  PDZ Sample Quality Assessment by Biochemical and Biophysical Characterizations.

Authors:  Célia Caillet-Saguy; Sébastien Brûlé; Nicolas Wolff; Bertrand Raynal
Journal:  Methods Mol Biol       Date:  2021

Review 2.  Characterizing conformational ensembles of multi-domain proteins using anisotropic paramagnetic NMR restraints.

Authors:  Xue-Ni Hou; Hidehito Tochio
Journal:  Biophys Rev       Date:  2022-01-11

3.  Cryptic binding properties of a transient folding intermediate in a PDZ tandem repeat.

Authors:  Francesca Malagrinò; Giuliana Fusco; Valeria Pennacchietti; Angelo Toto; Caterina Nardella; Livia Pagano; Alfonso de Simone; Stefano Gianni
Journal:  Protein Sci       Date:  2022-09       Impact factor: 6.993

4.  Deciphering the Molecular Interaction Between the Adhesion G Protein-Coupled Receptor ADGRV1 and its PDZ-Containing Regulator PDZD7.

Authors:  Baptiste Colcombet-Cazenave; Florence Cordier; Yanlei Zhu; Guillaume Bouvier; Eleni Litsardaki; Louise Laserre; Marie S Prevost; Bertrand Raynal; Célia Caillet-Saguy; Nicolas Wolff
Journal:  Front Mol Biosci       Date:  2022-06-28

Review 5.  PDZ Domains as Drug Targets.

Authors:  Nikolaj R Christensen; Jelena Čalyševa; Eduardo F A Fernandes; Susanne Lüchow; Louise S Clemmensen; Linda M Haugaard-Kedström; Kristian Strømgaard
Journal:  Adv Ther (Weinh)       Date:  2019-04-24

6.  Phylogenetic analysis of Harmonin homology domains.

Authors:  Baptiste Colcombet-Cazenave; Karen Druart; Crystel Bonnet; Christine Petit; Olivier Spérandio; Julien Guglielmini; Nicolas Wolff
Journal:  BMC Bioinformatics       Date:  2021-04-14       Impact factor: 3.169

7.  Deafness-related protein PDZD7 forms complex with the C-terminal tail of FCHSD2.

Authors:  Huang Wang; Dange Zhao; Haibo Du; Xiaoyan Zhai; Shaoxuan Wu; Lin Lin; Zhigang Xu; Qing Lu
Journal:  Biochem J       Date:  2022-06-30       Impact factor: 3.766

8.  Automatic Bayesian Weighting for SAXS Data.

Authors:  Yannick G Spill; Yasaman Karami; Pierre Maisonneuve; Nicolas Wolff; Michael Nilges
Journal:  Front Mol Biosci       Date:  2021-06-04

9.  Interaction of protocadherin-15 with the scaffold protein whirlin supports its anchoring of hair-bundle lateral links in cochlear hair cells.

Authors:  Vincent Michel; Elise Pepermans; Jacques Boutet de Monvel; Patrick England; Sylvie Nouaille; Alain Aghaie; Florent Delhommel; Nicolas Wolff; Isabelle Perfettini; Jean-Pierre Hardelin; Christine Petit; Amel Bahloul
Journal:  Sci Rep       Date:  2020-10-02       Impact factor: 4.379

  9 in total

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