Literature DB >> 28960304

Quantitative imaging of Candida utilis and its organelles by soft X-ray Nano-CT.

J Liu1, F Li1, L Chen1, Y Guan1, L Tian2, Y Xiong1, G Liu1, Y Tian1.   

Abstract

Soft X-ray microscopy has excellent characteristics for imaging cells and subcellular structures. In this paper, the yeast strain, Candida utilis, was imaged by soft X-ray microscopy and three-dimensional volumes were reconstructed with the SART-TV method. We performed segmentation on the reconstruction in three dimensions and identified several types of subcellular architecture within the specimen cells based on their linear absorption coefficient (LAC) values. Organelles can be identified by the correlation between the soft X-ray LAC values and the subcellular architectures. Quantitative analyses of the volume ratio of organelles to whole cell in different phases were also carried out according to the three-dimensional datasets. With such excellent features, soft X-ray imaging has a great influence in the field of biological cellular and subcellular research.
© 2017 The Authors Journal of Microscopy © 2017 Royal Microscopical Society.

Entities:  

Keywords:  Linear absorption coefficient (LAC); organelles identification; soft X-ray tomography; subcellular imaging; synchrotron radiation; yeast

Mesh:

Year:  2017        PMID: 28960304     DOI: 10.1111/jmi.12650

Source DB:  PubMed          Journal:  J Microsc        ISSN: 0022-2720            Impact factor:   1.758


  6 in total

1.  Quantitative three-dimensional nondestructive imaging of whole anaerobic ammonium-oxidizing bacteria.

Authors:  Meng Wen Peng; Yong Guan; Jian Hong Liu; Liang Chen; Han Wang; Zheng Zhe Xie; Hai Yan Li; You Peng Chen; Peng Liu; Peng Yan; Jin Song Guo; Gang Liu; Yu Shen; Fang Fang
Journal:  J Synchrotron Radiat       Date:  2020-04-17       Impact factor: 2.616

2.  Directly observing intracellular nanoparticle formation with nanocomputed tomography.

Authors:  Miaomiao Zhang; Yong Guan; Zheng Dang; Pinggen Zhang; Zhen Zheng; Liang Chen; Wen Kuang; Chenchen Wang; Gaolin Liang
Journal:  Sci Adv       Date:  2020-10-23       Impact factor: 14.136

3.  Three-dimensional imaging of mitochondrial cristae complexity using cryo-soft X-ray tomography.

Authors:  Carla C Polo; Miriam H Fonseca-Alaniz; Jian-Hua Chen; Axel Ekman; Gerry McDermott; Florian Meneau; José E Krieger; Ayumi A Miyakawa
Journal:  Sci Rep       Date:  2020-12-03       Impact factor: 4.379

4.  Biomimetic inorganic-organic hybrid nanoparticles from magnesium-substituted amorphous calcium phosphate clusters and polyacrylic acid molecules.

Authors:  Na Li; Wei Cui; Peifang Cong; Jie Tang; Yong Guan; Caihao Huang; Yunen Liu; Chengzhong Yu; Rui Yang; Xing Zhang
Journal:  Bioact Mater       Date:  2021-01-23

5.  Using soft X-ray tomography for rapid whole-cell quantitative imaging of SARS-CoV-2-infected cells.

Authors:  Valentina Loconte; Jian-Hua Chen; Mirko Cortese; Axel Ekman; Mark A Le Gros; Carolyn Larabell; Ralf Bartenschlager; Venera Weinhardt
Journal:  Cell Rep Methods       Date:  2021-10-28

6.  Limited angle tomography for transmission X-ray microscopy using deep learning.

Authors:  Yixing Huang; Shengxiang Wang; Yong Guan; Andreas Maier
Journal:  J Synchrotron Radiat       Date:  2020-02-13       Impact factor: 2.616

  6 in total

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