| Literature DB >> 28959682 |
Elizabeth A W Sigston1,2,3, Bryan R G Williams3,4.
Abstract
Experimental paradigms provide the framework for the understanding of cancer, and drive research and treatment, but are rarely considered by clinicians. The somatic mutation theory (SMT), in which cancer is considered a genetic disease, has been the predominant traditional model of cancer for over 50 years. More recently, alternative theories have been proposed, such as tissue organization field theory (TOFT), evolutionary models, and inflammatory models. Key concepts within the various models have led to them being difficult to reconcile. Progressively, it has been recognized that biological systems cannot be fully explained by the physicochemical properties of their constituent parts. There is an increasing call for a 'systems' approach. Incorporating the concepts of 'emergence', 'systems', 'thermodynamics', and 'chaos', a single integrated framework for carcinogenesis has been developed, enabling existing theories to become compatible as alternative mechanisms, facilitating the integration of bioinformatics and providing a structure in which translational research can flow from both 'benchtop to bedside' and 'bedside to benchtop'. In this review, a basic understanding of the key concepts of 'emergence', 'systems', 'system levels', 'complexity', 'thermodynamics', 'entropy', 'chaos', and 'fractals' is provided. Non-linear mathematical equations are included where possible to demonstrate compatibility with bioinformatics. Twelve principles that define the 'emergence framework of carcinogenesis' are developed, with principles 1-10 encapsulating the key concepts upon which the framework is built and their application to carcinogenesis. Principle 11 relates the framework to cancer progression. Principle 12 relates to the application of the framework to translational research. The 'emergence framework of carcinogenesis' collates current paradigms, concepts, and evidence around carcinogenesis into a single framework that incorporates previously incompatible viewpoints and ideas. Any researcher, scientist, or clinician involved in research, treatment, or prevention of cancer can employ this framework.Entities:
Keywords: carcinogenesis; chaos; emergence; entropy; fractals; systems biology; thermodynamics; translational research
Year: 2017 PMID: 28959682 PMCID: PMC5603758 DOI: 10.3389/fonc.2017.00198
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Somatic mutation theory.
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Cancer is a disease of genetic mutation. Cancer is derived from a single somatic cell. The initiation process, and therefore, the process of carcinogenesis, is irreversible. The default state of a cell is quiescence. Adjacent tissue has only a supporting role in carcinogenesis. A reductionism philosophy: the properties of the whole can be inferred, deduced, calculated, and predicted from the properties of the parts. Phenomena occurring at one level (cancer at tissue level) can be explained by understanding the properties at a lower level (molecular and chemical properties at the cellular level). There is unidirectional upward causation. |
Tissue organization field theory.
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Cancer is a disease of tissue organization comparable to organogenesis: carcinogenic agents destroy normal tissue architecture, interfering with normal cell–cell communication. The default state of the cell is proliferative with variation and motility. Carcinogenesis is reversible. A holistic or antireductionist philosophy: phenomena occurring at one level cannot be explained by understanding the properties at a lower level. There is unidirectional downward causation: genetic mutations and altered biochemistry are a result of disrupted tissue organization. |
Figure 1Formation of a water drop as an example of emergent hierarchical levels, with each level possessing a property or properties that is more than simply the sum of the properties of its parts.
Figure 2A pattern created by the Mandelbrot set exhibits an elaborate and infinitely complicated boundary that reveals progressively ever-finer recurring detail at increasing magnifications, indicated by the white arrows. The ‘style’ of this repeating detail depends on the region of the set being examined. The set’s boundary also incorporates smaller versions of the main shape, so the fractal property of self-similarity applies to the entire set and not just to its parts.
Figure 3Cancer emerges as a dynamic system at the level of the ‘functional tissue unit’. The red box area highlights the levels of importance in an emergence framework. μ(s) or the ‘system’ is the ‘functional tissue unit’. The logical components Ca(s) of the ‘functional tissue unit’ are the tissue components at the lower level.
Figure 4Mammary acinus as an example of a ‘functional tissue unit’, μ(s), the level at which ductal carcinoma as a system emerges. Again, the red box area highlights the levels of importance in an emergence framework. The logical components, Ca(s), of the ‘functional tissue unit’ are the tissue components at the level below, Level n + 2. Components at lower levels are important only through the impact they have on the components, Ca(s), by changing the components themselves and/or changing the structure, Sc(s). Physiological changes alter the environment, Eb(s), or mechanism, Md(s).
Figure 5A functional tissue unit is a metastable dynamic system oscillating between maintaining optimum function, maximal adaptability in response to inputs and outputs with its environment, and self-maintenance through repair, differentiation, and apoptosis. The natural law of a functional tissue unit is an inverse non-linear relationship between function, ‘F’, and growth/repair, ‘M’. This is represented graphically, by the equation with ‘k’ being a non-zero constant. If the functional tissue unit swings too far toward optimal function, it reduces its ability to adapt to environmental changes and will ultimately become a closed system with inability to gain energy from its surrounds and in accordance with the second law of thermodynamics will move toward entropy (aging and death). A functional tissue unit that undergoes excessive growth or repair is redirecting energy away from normal function and increases the need to generate additional usable energy from its environment, pushing it into the hyper-energized state.
An emergence framework of carcinogenesis: the 12 Principles.
| Principle 1 | Cancer is a dynamic complex system emerging at the level of the ‘functional tissue unit’ |
| Principle 2 | Cancer is not a single disease entity, but an emergence phenomenon that can occur across numerous functional tissue units by multiple processes to generate a mechanism of carcinogenesis that is specific to that functional unit and may be specific to an individual tumor; the common properties of cancer can be accomplished |
| Principle 3 | Causation of cancer is a property of the system and is not contributable at any single hierarchical level: multiscale causality associates causation at different levels concomitantly |
| Principle 4 | The ‘state’ of a cell is determined by its position within the functional tissue unit and the state of the functional tissue unit as a system. All living systems metabolize and are, therefore, dynamic over time. Defining a ‘default’ state of a cell as quiescent or proliferative is not relevant in an emergence framework of carcinogenesis |
| Principle 5 | A healthy functional tissue unit is a metastable system oscillating between maintaining optimum function, maximal adaptability in response to inputs and outputs with its environment, and self-maintenance through repair, differentiation and apoptosis in accordance with the natural law of a functional tissue unit as defined by: |
| Principle 6 | A functional tissue unit will have points of self-organized criticality in both the directions of entropy and chaos, beyond which a critical collapse occurs, resulting in loss of the morphological and physiological properties of the functional tissue unit setting the initial state from which cancer can emerge |
| Principle 7 | Reduced redundancy of healthy functional tissue units through either entropy (degeneration) or excessive repair in response to tissue trauma is associated with an increased risk of cancer |
| Principle 8 | Risk factors for cancer act to reduce redundancy of functional tissue units |
| Principle 9 | Loss of the properties that make a functional tissue unit a ‘system’ is a prerequisite to create the ‘initial state’ for the emergence of cancer |
| Principle 10 | ‘Cancer’ is the emergence of a new ‘system’ arising from the tissue components of a functional tissue unit that has lost its normal self-organization arrangement and function identifiable by changes in morphology and physiology |
| Principle 11 | Cancer progression is the deterministic development of a sequence of rapidly adapting emergent systems, each with identifiable patterns of morphology, physiology and behavior, the dynamics of which can be studied |
| Principle 12 | An emergence framework of carcinogenesis provides a common united framework for facilitating and integrating cancer research across all areas of basic, clinical, and translational research by directing focus on a common level at which the diagnosis of cancer is made, the functional tissue unit |