Literature DB >> 28957703

Preliminary identification of unicellular algal genus by using combined confocal resonance Raman spectroscopy with PCA and DPLS analysis.

Shixuan He1, Wanyi Xie2, Ping Zhang3, Shaoxi Fang2, Zhe Li4, Peng Tang2, Xia Gao4, Jinsong Guo3, Chaker Tlili2, Deqiang Wang5.   

Abstract

The analysis of algae and dominant alga plays important roles in ecological and environmental fields since it can be used to forecast water bloom and control its potential deleterious effects. Herein, we combine in vivo confocal resonance Raman spectroscopy with multivariate analysis methods to preliminary identify the three algal genera in water blooms at unicellular scale. Statistical analysis of characteristic Raman peaks demonstrates that certain shifts and different normalized intensities, resulting from composition of different carotenoids, exist in Raman spectra of three algal cells. Principal component analysis (PCA) scores and corresponding loading weights show some differences from Raman spectral characteristics which are caused by vibrations of carotenoids in unicellular algae. Then, discriminant partial least squares (DPLS) classification method is used to verify the effectiveness of algal identification with confocal resonance Raman spectroscopy. Our results show that confocal resonance Raman spectroscopy combined with PCA and DPLS could handle the preliminary identification of dominant alga for forecasting and controlling of water blooms.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Confocal resonance Raman spectroscopy; Discriminant partial least squares classification; Dominant alga; Principal component analysis

Mesh:

Substances:

Year:  2017        PMID: 28957703     DOI: 10.1016/j.saa.2017.09.036

Source DB:  PubMed          Journal:  Spectrochim Acta A Mol Biomol Spectrosc        ISSN: 1386-1425            Impact factor:   4.098


  3 in total

Review 1.  Raman Spectroscopy and Its Modifications Applied to Biological and Medical Research.

Authors:  Elvin S Allakhverdiev; Venera V Khabatova; Bekzhan D Kossalbayev; Elena V Zadneprovskaya; Oleg V Rodnenkov; Tamila V Martynyuk; Georgy V Maksimov; Saleh Alwasel; Tatsuya Tomo; Suleyman I Allakhverdiev
Journal:  Cells       Date:  2022-01-24       Impact factor: 6.600

2.  Detecting Phytoplankton Cell Viability Using NIR Raman Spectroscopy and PCA.

Authors:  Nina I Novikova; Hannah Matthews; Isabelle Williams; Mary A Sewell; Michel K Nieuwoudt; M Cather Simpson; Neil G R Broderick
Journal:  ACS Omega       Date:  2022-02-10

3.  The formation principle of micro-droplets induced by using optical tweezers.

Authors:  Cong Zhai; Chunguang Hu; Shuai Li; Yanhua Ma; Yajing Zhang; Tong Guo; Hongbin Li; Xiaotang Hu
Journal:  Nanoscale Adv       Date:  2020-11-16
  3 in total

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