Literature DB >> 28956920

Apparent Anomalous Diffusion in the Cytoplasm of Human Cells: The Effect of Probes' Polydispersity.

Tomasz Kalwarczyk1, Karina Kwapiszewska1, Krzysztof Szczepanski1, Krzysztof Sozanski1, Jedrzej Szymanski2, Bernadeta Michalska2, Paulina Patalas-Krawczyk2, Jerzy Duszynski2, Robert Holyst1.   

Abstract

This work, based on in vivo and in vitro measurements, as well as in silico simulations, provides a consistent analysis of diffusion of polydisperse nanoparticles in the cytoplasm of living cells. Using the example of fluorescence correlation spectroscopy (FCS), we show the effect of polydispersity of probes on the experimental results. Although individual probes undergo normal diffusion, in the ensemble of probes, an effective broadening of the distribution of diffusion times occurs-similar to anomalous diffusion. We introduced fluorescently labeled dextrans into the cytoplasm of HeLa cells and found that cytoplasmic hydrodynamic drag, exponentially dependent on probe size, extraordinarily broadens the distribution of diffusion times across the focal volume. As a result, the in vivo FCS data were effectively fitted with the anomalous subdiffusion model while for a monodisperse probe the normal diffusion model was most suitable. Diffusion time obtained from the anomalous diffusion model corresponds to a probe whose size is determined by the weight-average molecular weight of the polymer. The apparent anomaly exponent decreases with increasing polydispersity of the probes. Our results and methodology can be applied in intracellular studies of the mobility of nanoparticles, polymers, or oligomerizing proteins.

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Year:  2017        PMID: 28956920     DOI: 10.1021/acs.jpcb.7b07158

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  7 in total

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Authors:  Mohammad U Zahid; Liang Ma; Sung Jun Lim; Andrew M Smith
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Journal:  Sci Rep       Date:  2019-04-11       Impact factor: 4.379

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Journal:  J Phys Chem B       Date:  2022-09-16       Impact factor: 3.466

6.  Stability of cytoplasmic nanoviscosity during cell cycle of HeLa cells synchronized with Aphidicolin.

Authors:  Krzysztof Szczepański; Karina Kwapiszewska; Robert Hołyst
Journal:  Sci Rep       Date:  2019-11-11       Impact factor: 4.379

7.  Nanoscale Viscosity of Cytoplasm Is Conserved in Human Cell Lines.

Authors:  Karina Kwapiszewska; Krzysztof Szczepański; Tomasz Kalwarczyk; Bernadeta Michalska; Paulina Patalas-Krawczyk; Jędrzej Szymański; Tomasz Andryszewski; Michalina Iwan; Jerzy Duszyński; Robert Hołyst
Journal:  J Phys Chem Lett       Date:  2020-08-11       Impact factor: 6.475

  7 in total

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