Literature DB >> 28954959

Rapid Discrimination between Methicillin-Sensitive and Methicillin-Resistant Staphylococcus aureus Using MALDI-TOF Mass Spectrometry.

Kazuyuki Sogawa1, Masaharu Watanabe2, Takayuki Ishige2,3, Syunsuke Segawa2,3, Akiko Miyabe2, Syota Murata2, Tomoko Saito2, Akihiro Sanda1, Katsunori Furuhata4, Fumio Nomura5.   

Abstract

Methicillin-resistant Staphylococcus aureus (MRSA) is one of the major pathogens responsible for nosocomial infections. The presence of MRSA in a hospital is detrimental to patients and to hospital management. Thus, rapid identification of MRSA is needed. Here, we report on a prospective method to rapidly discriminate of MSSA from MRSA using matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) and support vector machine (SVM) analysis in 160 clinical isolates of S. aureus. The predictive model was tested using 100 S. aureus isolates (50 MSSA and 50 MRSA). The identification rates were 90.0% for MSSA and 87.5% for MRSA in a 10-fold cross-validation SVM. In blind test sets, 60 S. aureus isolates (30 MSSA and 30 MRSA) were correctly classified, with identification rates of 93.3% for MSSA and 86.7% for MRSA. The method proposed in this study using the predictive model enables detection of one colony in 5 minutes, and thus is useful at clinical sites at which rapid discrimination of MRSA from MSSA is required.

Entities:  

Keywords:  MALDI BioTyper software; MALDI-TOF MS; MRSA; MSSA; Rapid discrimination

Mesh:

Substances:

Year:  2017        PMID: 28954959     DOI: 10.4265/bio.22.163

Source DB:  PubMed          Journal:  Biocontrol Sci        ISSN: 1342-4815            Impact factor:   0.982


  13 in total

1.  Comparative genomics of Staphylococcus aureus associated with subclinical and clinical bovine mastitis.

Authors:  Lis S Rocha; Danielle M Silva; Mônica P Silva; Pedro Marcus P Vidigal; José Cleydson F Silva; Simony T Guerra; Márcio G Ribeiro; Tiago Antônio de O Mendes; Andréa de O B Ribon
Journal:  PLoS One       Date:  2019-08-07       Impact factor: 3.240

2.  Virulence Factors Found in Nasal Colonization and Infection of Methicillin-Resistant Staphylococcus aureus (MRSA) Isolates and Their Ability to Form a Biofilm.

Authors:  Thamiris Santana Machado; Felipe Ramos Pinheiro; Lialyz Soares Pereira Andre; Renata Freire Alves Pereira; Reginaldo Fernandes Correa; Gabriela Coutinho de Mello; Tainara Aparecida Nunes Ribeiro; Bruno Penna; Daniela Sachs; Fábio Aguiar-Alves
Journal:  Toxins (Basel)       Date:  2020-12-25       Impact factor: 4.546

3.  Bacterial species identification using MALDI-TOF mass spectrometry and machine learning techniques: A large-scale benchmarking study.

Authors:  Thomas Mortier; Anneleen D Wieme; Peter Vandamme; Willem Waegeman
Journal:  Comput Struct Biotechnol J       Date:  2021-11-09       Impact factor: 7.271

4.  MDRSA: A Web Based-Tool for Rapid Identification of Multidrug Resistant Staphylococcus aureus Based on Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.

Authors:  Chia-Ru Chung; Zhuo Wang; Jing-Mei Weng; Hsin-Yao Wang; Li-Ching Wu; Yi-Ju Tseng; Chun-Hsien Chen; Jang-Jih Lu; Jorng-Tzong Horng; Tzong-Yi Lee
Journal:  Front Microbiol       Date:  2021-12-03       Impact factor: 5.640

5.  Combination of MALDI-TOF Mass Spectrometry and Machine Learning for Rapid Antimicrobial Resistance Screening: The Case of Campylobacter spp.

Authors:  Maureen Feucherolles; Morgane Nennig; Sören L Becker; Delphine Martiny; Serge Losch; Christian Penny; Henry-Michel Cauchie; Catherine Ragimbeau
Journal:  Front Microbiol       Date:  2022-02-18       Impact factor: 5.640

6.  Large-Scale Samples Based Rapid Detection of Ciprofloxacin Resistance in Klebsiella pneumoniae Using Machine Learning Methods.

Authors:  Chunxuan Wang; Zhuo Wang; Hsin-Yao Wang; Chia-Ru Chung; Jorng-Tzong Horng; Jang-Jih Lu; Tzong-Yi Lee
Journal:  Front Microbiol       Date:  2022-03-08       Impact factor: 5.640

7.  Rapid Identification of Methicillin-Resistant Staphylococcus aureus Using MALDI-TOF MS and Machine Learning from over 20,000 Clinical Isolates.

Authors:  Jiaxin Yu; Ni Tien; Yu-Ching Liu; Der-Yang Cho; Jia-Wen Chen; Yin-Tai Tsai; Yu-Chen Huang; Huei-Jen Chao; Chao-Jung Chen
Journal:  Microbiol Spectr       Date:  2022-03-16

8.  Mass spectrometry and machine learning for the accurate diagnosis of benzylpenicillin and multidrug resistance of Staphylococcus aureus in bovine mastitis.

Authors:  Necati Esener; Alexandre Maciel-Guerra; Katharina Giebel; Daniel Lea; Martin J Green; Andrew J Bradley; Tania Dottorini
Journal:  PLoS Comput Biol       Date:  2021-06-11       Impact factor: 4.475

9.  Topological and kernel-based microbial phenotype prediction from MALDI-TOF mass spectra.

Authors:  Caroline Weis; Max Horn; Bastian Rieck; Aline Cuénod; Adrian Egli; Karsten Borgwardt
Journal:  Bioinformatics       Date:  2020-07-01       Impact factor: 6.937

Review 10.  Laboratory-Based and Point-of-Care Testing for MSSA/MRSA Detection in the Age of Whole Genome Sequencing.

Authors:  Alex van Belkum; Olivier Rochas
Journal:  Front Microbiol       Date:  2018-06-29       Impact factor: 5.640

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