Literature DB >> 28945533

Ornithinimicrobium flavum sp. nov., isolated from the leaf of Paris polyphylla.

Xiao-Mei Fang1, Dong Yan1, Jing-Lin Bai1, Jing Su1, Hong-Yu Liu1, Bai-Ping Ma2, Yu-Qin Zhang1, Li-Yan Yu1.   

Abstract

A Gram-positive bacterium originating from the surface-sterilized leaf of Paris polyphylla var. yunnanensis (Franch.) was characterized by using a polyphasic approach. The isolate formed yellow, smooth, circular colonies on nutrient agar with 0.2 % starch (NSA). Cells were non-motile, non-sporulating, irregular rods or cocci. Strain CPCC 203535T had the highest 16S rRNA gene sequence similarity to the type strain of Ornithinimicrobium kibberense (96.9 %) and formed the deepest branch in the genus Ornithinimicrobium in the neighbour-joining (NJ) phylogenetic tree based on 16S rRNA gene sequences. The major menaquinones of strain CPCC 203535T were MK-8(H4), MK-8(H2) and MK-8. The peptidoglycan contained ornithine as the diagnostic diamino acid. The polar lipid profile consisted of diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylinositol (PI) and unknown lipid (UL). The major fatty acids iso-C14 : 0, iso-C15 : 0, iso-C16 : 0 and anteiso-C15 : 0 were consistent with the fatty acid patterns reported for members of the genus Ornithinimicrobium. The DNA G+C composition is 71.4 mol%. The results of physiological and biochemical tests allowed phenotypic differentiation of strain CPCC 203535T from its closest phylogenetic species in the genus Ornithinimicrobium. Strain CPCC 203535T represents a novel species of the genus Ornithinimicrobium, for which the name Ornithinimicrobium flavum sp. nov. is proposed, with CPCC 203535T (=NBRC 109452 T=KCTC 29164T) as the type strain.

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Keywords:  CPCC 203535; Ornithinimicrobium flavum; Paris polyphylla; new taxa-actinobacteria

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Year:  2017        PMID: 28945533     DOI: 10.1099/ijsem.0.002328

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

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Authors:  So-Yeon Lee; Hojun Sung; Pil Soo Kim; Hyun Sik Kim; Jae-Yun Lee; June-Young Lee; Yun-Seok Jeong; Euon Jung Tak; Jeong Eun Han; Dong-Wook Hyun; Jin-Woo Bae
Journal:  J Microbiol       Date:  2021-09-27       Impact factor: 3.422

2.  Bacterial and Archaeal Structural Diversity in Several Biodeterioration Patterns on the Limestone Walls of the Old Cathedral of Coimbra.

Authors:  Catarina Coelho; Nuno Mesquita; Inês Costa; Fabiana Soares; João Trovão; Helena Freitas; António Portugal; Igor Tiago
Journal:  Microorganisms       Date:  2021-03-30
  2 in total

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