Literature DB >> 28943337

Near-Atomic Resolution Structure Determination in Over-Focus with Volta Phase Plate by Cs-Corrected Cryo-EM.

Xiao Fan1, Lingyun Zhao1, Chuan Liu1, Jin-Can Zhang2, Kelong Fan3, Xiyun Yan4, Hai-Lin Peng2, Jianlin Lei5, Hong-Wei Wang6.   

Abstract

Volta phase plate (VPP) is a recently developed transmission electron microscope (TEM) apparatus that can significantly enhance the image contrast of biological samples in cryoelectron microscopy, and therefore provide the possibility to solve structures of relatively small macromolecules at high-resolution. In this work, we performed theoretical analysis and found that using phase plate on objective lens spherical aberration (Cs)-corrected TEM may gain some interesting optical properties, including the over-focus imaging of macromolecules. We subsequently evaluated the imaging strategy of frozen-hydrated apo-ferritin with VPP on a Cs-corrected TEM and obtained the structure of apo-ferritin at near-atomic resolution from both under- and over-focused dataset, illustrating the feasibility and new potential of combining VPP with Cs-corrected TEM for high-resolution cryo-EM.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  CTF; Cs-corrector; apo-ferritin; cryo-EM; graphene grid; over-focus; volta phase plate

Mesh:

Substances:

Year:  2017        PMID: 28943337     DOI: 10.1016/j.str.2017.08.008

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  9 in total

1.  Sub-3 Å apoferritin structure determined with full range of phase shifts using a single position of volta phase plate.

Authors:  Kunpeng Li; Chen Sun; Thomas Klose; Jose Irimia-Dominguez; Frank S Vago; Ruben Vidal; Wen Jiang
Journal:  J Struct Biol       Date:  2019-03-27       Impact factor: 2.867

2.  Cryo electron tomography with volta phase plate reveals novel structural foundations of the 96-nm axonemal repeat in the pathogen Trypanosoma brucei.

Authors:  Simon Imhof; Jiayan Zhang; Hui Wang; Khanh Huy Bui; Hoangkim Nguyen; Ivo Atanasov; Wong H Hui; Shun Kai Yang; Z Hong Zhou; Kent L Hill
Journal:  Elife       Date:  2019-11-11       Impact factor: 8.140

Review 3.  Cryo-EM for Small Molecules Discovery, Design, Understanding, and Application.

Authors:  Giovanna Scapin; Clinton S Potter; Bridget Carragher
Journal:  Cell Chem Biol       Date:  2018-08-09       Impact factor: 8.116

4.  Structure of the human plasma membrane Ca2+-ATPase 1 in complex with its obligatory subunit neuroplastin.

Authors:  Deshun Gong; Ximin Chi; Kang Ren; Gaoxingyu Huang; Gewei Zhou; Nieng Yan; Jianlin Lei; Qiang Zhou
Journal:  Nat Commun       Date:  2018-09-06       Impact factor: 14.919

5.  Different functional states of fusion protein gB revealed on human cytomegalovirus by cryo electron tomography with Volta phase plate.

Authors:  Zhu Si; Jiayan Zhang; Sakar Shivakoti; Ivo Atanasov; Chang-Lu Tao; Wong H Hui; Kang Zhou; Xuekui Yu; Weike Li; Ming Luo; Guo-Qiang Bi; Z Hong Zhou
Journal:  PLoS Pathog       Date:  2018-12-03       Impact factor: 6.823

6.  Single particle cryo-EM reconstruction of 52 kDa streptavidin at 3.2 Angstrom resolution.

Authors:  Xiao Fan; Jia Wang; Xing Zhang; Zi Yang; Jin-Can Zhang; Lingyun Zhao; Hai-Lin Peng; Jianlin Lei; Hong-Wei Wang
Journal:  Nat Commun       Date:  2019-06-03       Impact factor: 14.919

7.  A comparative study of single-particle cryo-EM with liquid-nitrogen and liquid-helium cooling.

Authors:  Olivia Pfeil-Gardiner; Deryck J Mills; Janet Vonck; Werner Kuehlbrandt
Journal:  IUCrJ       Date:  2019-10-22       Impact factor: 4.769

8.  In situ cryo-electron tomography reveals local cellular machineries for axon branch development.

Authors:  Hana Nedozralova; Nirakar Basnet; Iosune Ibiricu; Satish Bodakuntla; Christian Biertümpfel; Naoko Mizuno
Journal:  J Cell Biol       Date:  2022-03-09       Impact factor: 10.539

9.  Structure of the trypanosome paraflagellar rod and insights into non-planar motility of eukaryotic cells.

Authors:  Jiayan Zhang; Hui Wang; Simon Imhof; Xueting Zhou; Shiqing Liao; Ivo Atanasov; Wong H Hui; Kent L Hill; Z Hong Zhou
Journal:  Cell Discov       Date:  2021-07-13       Impact factor: 10.849

  9 in total

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