Literature DB >> 28939950

Anatomy of autophagy: from the beginning to the end.

Xiaoyong Zhi1, Wenzhi Feng2, Yueguang Rong3, Rong Liu4.   

Abstract

Autophagy is a highly regulated process in eukaryotes to maintain homeostasis and manage stress responses. Understanding the regulatory mechanisms and key players involved in autophagy will provide critical insights into disease-related pathogenesis and potential clinical treatments. In this review, we describe the hallmark events involved in autophagy, from its initiation, to the final destruction of engulfed targets. Furthermore, based on structural and biochemical data, we evaluate the roles of key players in these processes and provide rationale as to how they control autophagic events in a highly ordered manner.

Keywords:  ATG; Autophagosome; Lysosome; SNARE; Vps34

Mesh:

Year:  2017        PMID: 28939950     DOI: 10.1007/s00018-017-2657-z

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  114 in total

Review 1.  Protein turnover via autophagy: implications for metabolism.

Authors:  Noboru Mizushima; Daniel J Klionsky
Journal:  Annu Rev Nutr       Date:  2007       Impact factor: 11.848

2.  Sequestration revisited: integrating traditional electron microscopy, de novo assembly and new results.

Authors:  Attila L Kovács; Zsolt Pálfia; Gábor Réz; Tibor Vellai; János Kovács
Journal:  Autophagy       Date:  2007-06-15       Impact factor: 16.016

3.  Clathrin and phosphatidylinositol-4,5-bisphosphate regulate autophagic lysosome reformation.

Authors:  Yueguang Rong; Mei Liu; Liang Ma; Wanqing Du; Hanshuo Zhang; Yuan Tian; Zhen Cao; Ying Li; He Ren; Chuanmao Zhang; Lin Li; She Chen; Jianzhong Xi; Li Yu
Journal:  Nat Cell Biol       Date:  2012-08-12       Impact factor: 28.824

4.  Autophagosomes form at ER-mitochondria contact sites.

Authors:  Maho Hamasaki; Nobumichi Furuta; Atsushi Matsuda; Akiko Nezu; Akitsugu Yamamoto; Naonobu Fujita; Hiroko Oomori; Takeshi Noda; Tokuko Haraguchi; Yasushi Hiraoka; Atsuo Amano; Tamotsu Yoshimori
Journal:  Nature       Date:  2013-03-03       Impact factor: 49.962

5.  Structural basis of the autophagy-related LC3/Atg13 LIR complex: recognition and interaction mechanism.

Authors:  Hironori Suzuki; Keisuke Tabata; Eiji Morita; Masato Kawasaki; Ryuichi Kato; Renwick C J Dobson; Tamotsu Yoshimori; Soichi Wakatsuki
Journal:  Structure       Date:  2013-11-27       Impact factor: 5.006

Review 6.  Regulation mechanisms and signaling pathways of autophagy.

Authors:  Congcong He; Daniel J Klionsky
Journal:  Annu Rev Genet       Date:  2009       Impact factor: 16.830

7.  Beclin 1, an Essential Component and Master Regulator of PI3K-III in Health and Disease.

Authors:  Nicole C McKnight; Yue Zhenyu
Journal:  Curr Pathobiol Rep       Date:  2013-12-01

8.  A HORMA domain in Atg13 mediates PI 3-kinase recruitment in autophagy.

Authors:  Christine C Jao; Michael J Ragusa; Robin E Stanley; James H Hurley
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-18       Impact factor: 11.205

9.  ER exit sites are physical and functional core autophagosome biogenesis components.

Authors:  Martin Graef; Jonathan R Friedman; Christopher Graham; Mohan Babu; Jodi Nunnari
Journal:  Mol Biol Cell       Date:  2013-07-31       Impact factor: 4.138

10.  hVps15, but not Ca2+/CaM, is required for the activity and regulation of hVps34 in mammalian cells.

Authors:  Ying Yan; Rory J Flinn; Haiyan Wu; Rachel S Schnur; Jonathan M Backer
Journal:  Biochem J       Date:  2009-02-01       Impact factor: 3.857

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  18 in total

Review 1.  Stress - (self) eating: Epigenetic regulation of autophagy in response to psychological stress.

Authors:  Deepika Puri; Deepa Subramanyam
Journal:  FEBS J       Date:  2019-04-04       Impact factor: 5.542

2.  Differences of basic and induced autophagic activity between K562 and K562/ADM cells.

Authors:  Feifei Wang; Jing Chen; Zhewen Zhang; Juan Yi; Minmin Yuan; Mingyan Wang; Na Zhang; Xuemin Qiu; Hulai Wei; Ling Wang
Journal:  Intractable Rare Dis Res       Date:  2017-11

3.  Commentary: Reconciling Hygiene and Cleanliness: A New Perspective from Human Microbiome.

Authors:  Boxuan Yu; Bowei Yu; Ligen Yu
Journal:  Indian J Microbiol       Date:  2020-03-12       Impact factor: 2.461

4.  Patterns of Apoptosis and Autophagy Activation After Hydroxyurea Exposure in the Rat Cerebellar External Granular Layer: an Immunoperoxidase and Ultrastructural Analysis.

Authors:  Vanessa Molina; Lucía Rodríguez-Vázquez; Joaquín Martí
Journal:  Neurotox Res       Date:  2019-08-13       Impact factor: 3.911

Review 5.  Demarcation of Viral Shelters Results in Destruction by Membranolytic GTPases: Antiviral Function of Autophagy Proteins and Interferon-Inducible GTPases.

Authors:  Hailey M Brown; Scott B Biering; Allen Zhu; Jayoung Choi; Seungmin Hwang
Journal:  Bioessays       Date:  2018-03-30       Impact factor: 4.345

6.  Enriched environment boosts the post-stroke recovery of neurological function by promoting autophagy.

Authors:  Yi-Hao Deng; Ling-Ling Dong; Yong-Jie Zhang; Xiao-Ming Zhao; Hong-Yun He
Journal:  Neural Regen Res       Date:  2021-05       Impact factor: 5.135

Review 7.  The FKBP51 Glucocorticoid Receptor Co-Chaperone: Regulation, Function, and Implications in Health and Disease.

Authors:  Gabriel R Fries; Nils C Gassen; Theo Rein
Journal:  Int J Mol Sci       Date:  2017-12-05       Impact factor: 5.923

Review 8.  Autophagy and Noroviruses.

Authors:  Kevin Furlong; Seungmin Hwang
Journal:  Viruses       Date:  2019-03-12       Impact factor: 5.048

9.  EZH2 inhibits autophagic cell death of aortic vascular smooth muscle cells to affect aortic dissection.

Authors:  Rui Li; Xin Yi; Xiang Wei; Bo Huo; Xian Guo; Cai Cheng; Ze-Min Fang; Jing Wang; Xin Feng; Ping Zheng; Yun-Shu Su; Jackson Ferdinand Masau; Xue-Hai Zhu; Ding-Sheng Jiang
Journal:  Cell Death Dis       Date:  2018-02-07       Impact factor: 8.469

10.  Exocyst Subcomplex Functions in Autophagosome Biogenesis by Regulating Atg9 Trafficking.

Authors:  Sunaina Singh; Ruchika Kumari; Sarika Chinchwadkar; Amol Aher; Saravanan Matheshwaran; Ravi Manjithaya
Journal:  J Mol Biol       Date:  2019-05-17       Impact factor: 5.469

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