Literature DB >> 28937210

Multivariate Analysis of Two-Dimensional 1H, 13C Methyl NMR Spectra of Monoclonal Antibody Therapeutics To Facilitate Assessment of Higher Order Structure.

Luke W Arbogast1, Frank Delaglio1, John E Schiel1, John P Marino1.   

Abstract

Two-dimensional (2D) 1H-13C methyl NMR provides a powerful tool to probe the higher order structure (HOS) of monoclonal antibodies (mAbs), since spectra can readily be acquired on intact mAbs at natural isotopic abundance, and small changes in chemical environment and structure give rise to observable changes in corresponding spectra, which can be interpreted at atomic resolution. This makes it possible to apply 2D NMR spectral fingerprinting approaches directly to drug products in order to systematically characterize structure and excipient effects. Systematic collections of NMR spectra are often analyzed in terms of the changes in specifically identified peak positions, as well as changes in peak height and line widths. A complementary approach is to apply principal component analysis (PCA) directly to the matrix of spectral data, correlating spectra according to similarities and differences in their overall shapes, rather than according to parameters of individually identified peaks. This is particularly well-suited for spectra of mAbs, where some of the individual peaks might not be well resolved. Here we demonstrate the performance of the PCA method for discriminating structural variation among systematic sets of 2D NMR fingerprint spectra using the NISTmAb and illustrate how spectral variability identified by PCA may be correlated to structure.

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Year:  2017        PMID: 28937210      PMCID: PMC5886730          DOI: 10.1021/acs.analchem.7b03571

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  22 in total

1.  2D (1)H(N), (15)N Correlated NMR Methods at Natural Abundance for Obtaining Structural Maps and Statistical Comparability of Monoclonal Antibodies.

Authors:  Luke W Arbogast; Robert G Brinson; Trina Formolo; J Todd Hoopes; John P Marino
Journal:  Pharm Res       Date:  2015-10-09       Impact factor: 4.200

2.  Profiling formulated monoclonal antibodies by (1)H NMR spectroscopy.

Authors:  Leszek Poppe; John B Jordan; Ken Lawson; Matthew Jerums; Izydor Apostol; Paul D Schnier
Journal:  Anal Chem       Date:  2013-09-24       Impact factor: 6.986

3.  Spin Diffusion Editing for Structural Fingerprints of Therapeutic Antibodies.

Authors:  Joshua Franks; John N Glushka; Michael T Jones; David H Live; Qin Zou; James H Prestegard
Journal:  Anal Chem       Date:  2015-12-22       Impact factor: 6.986

4.  On the Analytical Superiority of 1D NMR for Fingerprinting the Higher Order Structure of Protein Therapeutics Compared to Multidimensional NMR Methods.

Authors:  Leszek Poppe; John B Jordan; Gary Rogers; Paul D Schnier
Journal:  Anal Chem       Date:  2015-05-14       Impact factor: 6.986

5.  NMR profiling of biomolecules at natural abundance using 2D 1H-15N and 1H-13C multiplicity-separated (MS) HSQC spectra.

Authors:  Kang Chen; Darón I Freedberg; David A Keire
Journal:  J Magn Reson       Date:  2014-12-04       Impact factor: 2.229

6.  Assessment of higher order structure comparability in therapeutic proteins using nuclear magnetic resonance spectroscopy.

Authors:  Carlos A Amezcua; Christina M Szabo
Journal:  J Pharm Sci       Date:  2013-04-09       Impact factor: 3.534

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  Differentiation of generic enoxaparins marketed in the United States by employing NMR and multivariate analysis.

Authors:  Marco Guerrini; Timothy R Rudd; Lucio Mauri; Eleonora Macchi; Jawed Fareed; Edwin A Yates; Annamaria Naggi; Giangiacomo Torri
Journal:  Anal Chem       Date:  2015-08-06       Impact factor: 6.986

9.  Chemometric approach in quantification of structural identity/similarity of proteins in biopharmaceuticals.

Authors:  S Zuperl; P Pristovsek; V Menart; V Gaberc-Porekar; M Novic
Journal:  J Chem Inf Model       Date:  2007-04-26       Impact factor: 4.956

10.  Physicochemical and functional comparability between the proposed biosimilar rituximab GP2013 and originator rituximab.

Authors:  Jan Visser; Isabel Feuerstein; Thomas Stangler; Timo Schmiederer; Cornelius Fritsch; Martin Schiestl
Journal:  BioDrugs       Date:  2013-10       Impact factor: 5.807

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  21 in total

1.  Site-specific glycan-conjugated NISTmAb antibody drug conjugate mimetics: synthesis, characterization, and utility.

Authors:  Brian Agnew; Shanhua Lin; Terry Zhang; Robert Aggeler; Trina Mouchahoir; John Schiel
Journal:  Anal Bioanal Chem       Date:  2021-07-06       Impact factor: 4.142

2.  Effect of Chemical Oxidation on the Higher Order Structure, Stability, Aggregation, and Biological Function of Interferon Alpha-2a: Role of Local Structural Changes Detected by 2D NMR.

Authors:  Dinen D Shah; Surinder M Singh; Krishna M G Mallela
Journal:  Pharm Res       Date:  2018-10-15       Impact factor: 4.200

3.  Structural Fingerprinting of siRNA Therapeutics by Solution NMR Spectroscopy.

Authors:  Owen B Becette; Anh Tran; Jace W Jones; John P Marino; Robert G Brinson
Journal:  Nucleic Acid Ther       Date:  2022-03-09       Impact factor: 4.244

Review 4.  Mass spectrometry-based methods in characterization of the higher order structure of protein therapeutics.

Authors:  Igor A Kaltashov; Cedric E Bobst; Jake Pawlowski; Guanbo Wang
Journal:  J Pharm Biomed Anal       Date:  2020-02-12       Impact factor: 3.935

5.  Comparative Analysis of One-Dimensional Protein Fingerprint by Line Shape Enhancement and Two-Dimensional 1H,13C Methyl NMR Methods for Characterization of the Higher Order Structure of IgG1 Monoclonal Antibodies.

Authors:  Korth W Elliott; Houman Ghasriani; Mats Wikström; John P Giddens; Yves Aubin; Frank Delaglio; John P Marino; Luke W Arbogast
Journal:  Anal Chem       Date:  2020-04-14       Impact factor: 6.986

6.  2D J-correlated proton NMR experiments for structural fingerprinting of biotherapeutics.

Authors:  Robert G Brinson; John P Marino
Journal:  J Magn Reson       Date:  2019-08-20       Impact factor: 2.229

7.  Probing Conformational Diversity of Fc Domains in Aggregation-Prone Monoclonal Antibodies.

Authors:  Subhabrata Majumder; Michael T Jones; Michael Kimmel; Arun Alphonse Ignatius
Journal:  Pharm Res       Date:  2018-09-25       Impact factor: 4.200

Review 8.  A synopsis of recent developments defining how N-glycosylation impacts immunoglobulin G structure and function.

Authors:  Yoshiki Yamaguchi; Adam W Barb
Journal:  Glycobiology       Date:  2020-03-20       Impact factor: 4.313

9.  Chemical Structure and Composition of Major Glycans Covalently Linked to Therapeutic Monoclonal Antibodies by Middle-Down Nuclear Magnetic Resonance.

Authors:  Jiangnan Peng; Sharadrao M Patil; David A Keire; Kang Chen
Journal:  Anal Chem       Date:  2018-08-27       Impact factor: 6.986

10.  Assessment of the Higher-Order Structure of Formulated Monoclonal Antibody Therapeutics by 2D Methyl Correlated NMR and Principal Component Analysis.

Authors:  Luke W Arbogast; Frank Delaglio; Robert G Brinson; John P Marino
Journal:  Curr Protoc Protein Sci       Date:  2020-06
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