Literature DB >> 28935911

Directing evolution: the next revolution in drug discovery?

Andrew M Davis1, Alleyn T Plowright2, Eric Valeur1.   

Abstract

The strong biological rationale to pursue challenging drug targets such as protein-protein interactions has stimulated the development of novel screening strategies, such as DNA-encoded libraries, to allow broader areas of chemical space to be searched. There has also been renewed interest in screening natural products, which are the result of evolutionary selection for a function, such as interference with a key signalling pathway of a competing organism. However, recent advances in several areas, such as understanding of the biosynthetic pathways for natural products, synthetic biology and the development of biosensors to detect target molecules, are now providing new opportunities to directly harness evolutionary pressure to identify and optimize compounds with desired bioactivities. Here, we describe innovations in the key components of such strategies and highlight pioneering examples that indicate the potential of the directed-evolution concept. We also discuss the scientific gaps and challenges that remain to be addressed to realize this potential more broadly in drug discovery.

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Year:  2017        PMID: 28935911     DOI: 10.1038/nrd.2017.146

Source DB:  PubMed          Journal:  Nat Rev Drug Discov        ISSN: 1474-1776            Impact factor:   84.694


  22 in total

Review 1.  Trends in peptide drug discovery.

Authors:  Markus Muttenthaler; Glenn F King; David J Adams; Paul F Alewood
Journal:  Nat Rev Drug Discov       Date:  2021-02-03       Impact factor: 84.694

Review 2.  Expanding the medicinal chemistry synthetic toolbox.

Authors:  Jonas Boström; Dean G Brown; Robert J Young; György M Keserü
Journal:  Nat Rev Drug Discov       Date:  2018-08-24       Impact factor: 84.694

3.  Scalable, Continuous Evolution of Genes at Mutation Rates above Genomic Error Thresholds.

Authors:  Arjun Ravikumar; Garri A Arzumanyan; Muaeen K A Obadi; Alex A Javanpour; Chang C Liu
Journal:  Cell       Date:  2018-11-08       Impact factor: 41.582

4.  Evolution of C-Terminal Modification Tolerance in Full-Length and Split T7 RNA Polymerase Biosensors.

Authors:  Jinyue Pu; Michael Disare; Bryan C Dickinson
Journal:  Chembiochem       Date:  2019-04-17       Impact factor: 3.164

5.  In silico design and in vitro assessment of anti-Helicobacter pylori compounds as potential small-molecule arginase inhibitors.

Authors:  Ana Thereza Fiori-Duarte; João Paulo de Oliveira Guarnieri; Jessica Rodrigues Pereira de Oliveira Borlot; Marcelo Lancellotti; Ricardo Pereira Rodrigues; Rodrigo Rezende Kitagawa; Daniel Fábio Kawano
Journal:  Mol Divers       Date:  2022-01-08       Impact factor: 2.943

6.  Development of Genetically Encoded Biosensors for Reporting the Methyltransferase-Dependent Biosynthesis of Semisynthetic Macrolide Antibiotics.

Authors:  Yiwei Li; Megan Reed; H Tonie Wright; T Ashton Cropp; Gavin J Williams
Journal:  ACS Synth Biol       Date:  2021-09-21       Impact factor: 5.249

7.  Engineering selective competitors for the discrimination of highly conserved protein-protein interaction modules.

Authors:  Charlotte Rimbault; Kashyap Maruthi; Christelle Breillat; Camille Genuer; Sara Crespillo; Virginia Puente-Muñoz; Ingrid Chamma; Isabel Gauthereau; Ségolène Antoine; Coraline Thibaut; Fabienne Wong Jun Tai; Benjamin Dartigues; Dolors Grillo-Bosch; Stéphane Claverol; Christel Poujol; Daniel Choquet; Cameron D Mackereth; Matthieu Sainlos
Journal:  Nat Commun       Date:  2019-10-04       Impact factor: 14.919

8.  A System for the Evolution of Protein-Protein Interaction Inducers.

Authors:  Jeffrey A Dewey; Saara-Anne Azizi; Vivian Lu; Bryan C Dickinson
Journal:  ACS Synth Biol       Date:  2021-07-28       Impact factor: 5.249

Review 9.  The science of puromycin: From studies of ribosome function to applications in biotechnology.

Authors:  Ranen Aviner
Journal:  Comput Struct Biotechnol J       Date:  2020-04-24       Impact factor: 7.271

10.  Proteomimetic surface fragments distinguish targets by function.

Authors:  Attila Tököli; Beáta Mag; Éva Bartus; Edit Wéber; Gerda Szakonyi; Márton A Simon; Ágnes Czibula; Éva Monostori; László Nyitray; Tamás A Martinek
Journal:  Chem Sci       Date:  2020-09-10       Impact factor: 9.825

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