| Literature DB >> 28932769 |
Darrell Green1, Irina Mohorianu2, Isabelle Piec1, Jeremy Turner3, Clare Beadsmoore4, Andoni Toms4, Richard Ball5, John Nolan6, Iain McNamara6, Tamas Dalmay2, William D Fraser1,3,7.
Abstract
Phosphaturic mesenchymal tumours are a heterogeneous set of bone and soft tissue neoplasms that can cause a number of paraneoplastic syndromes such as tumour induced osteomalacia. The term phosphaturic comes from the common finding that these tumours secrete high levels of fibroblast growth factor 23 which causes renal phosphate wasting leading to hypophosphatemia. Phosphaturic mesenchymal tumours are rare and diagnosis is difficult. A very active 68 year old male presented with bone pain and muscle weakness. He was hypophosphataemic and total alkaline phosphatase was markedly elevated. The patient was placed on vitamin D supplementation but his condition progressed. In the fifth year of presentation the patient required the use of a wheelchair and described "explosive" bone pain on physical contact. Serum 1,25 dihydroxyvitamin D was low and serum fibroblast growth factor 23 was significantly elevated, raising suspicion of a phosphaturic mesenchymal tumour. A lesion was detected in his left femoral head and the patient underwent a total hip replacement. The patient displayed a rapid improvement to his condition and during a three year follow up period he returned to an active lifestyle. As molecular testing may help provide a robust diagnosis and is particularly useful in rare diseases we took a next generation sequencing approach to identify a differential expression of small RNAs in the resected tumour. Small RNAs are non-coding RNA molecules that play a key role in regulation of gene expression and can be used as specific biomarkers. We found an upregulation of miR-197. We also found a downregulation of miR-20b, miR-144 and miR-335 which is a small RNA profile typical of osteosarcoma. MiR-21, the most frequently upregulated microRNA in cancer, was downregulated. We conclude that the specific small RNA profile is typical of osteosarcoma except for the downregulation of oncogenic miR-21. Transcriptional plasticity of miR-197, which is computationally predicted to target fibroblast growth factor 23 messenger RNA, may be upregulated in a cellular effort to correct the ectopic expression of the protein.Entities:
Keywords: FGF23; Hypophosphatemia; Next generation sequencing; Tumour; microRNA
Year: 2017 PMID: 28932769 PMCID: PMC5596358 DOI: 10.1016/j.bonr.2017.09.001
Source DB: PubMed Journal: Bone Rep ISSN: 2352-1872
Fig. 1The clinical course of a patient who presented with bone pain and muscle weakness. (A) Anteroposterior radiographs of the left femoral head and neck, demonstrating the typical but often subtle features of conventional osteomalacia with coarse ill-defined secondary trabeculae (arrow). (B) Anteroposterior radiograph of the right tibia demonstrating medial and lateral periosteal reactions along the proximal metaphysis (arrows). (C) Radionuclide bone scintigram demonstrating “H” shaped radiotracer uptake in the sacrum (arrow) with smaller foci of radiotracer uptake in the proximal tibiae (arrowheads). Proximal humeri, left glenoid, left lesser trochanter, right distal tibia and multiple ribs display focal, oft linear tracer accumulation in keeping with insufficiency fractures. (D) Anterior and posterior late phase images from on octreotide radionuclide examination demonstrating radiotracer uptake (arrow) in the left femoral head. (E) A coronal reformatted CT of the pelvis demonstrates a lesion in the left femoral head of the same attenuation as the surrounding medulla but demarcated by a thin sclerotic margin (arrow). There is diffuse medullary sclerosis throughout the lumbar spine (arrowhead). (F) Coronal fused 18Fluorodeoxyglucose demonstrating increased tracer uptake in the lesion. (G) Photomicrograph at 20 × magnification of the lesion biopsy stained with haematoxylin and eosin. There is irregularly thickened trabecular bone with intervening densely cellular tumour. (H) Photomicrograph at 40 × magnification of anti-FGF23 negative control. (I) Photomicrograph at 40 × magnification of anti-FGF23 positive staining.
Fig. 2Serum biochemistry performed on a patient who presented to our clinic with bone pain and muscle weakness. In the fifth year we detected 1,25(OH)2D deficiency and C-Terminal FGF23 elevation which initiated the search for a PMT. A PMT was discovered and resected and the patient was followed up for three years. (A) Serum phosphate is consistently deficient until normalised by tumour resection. (B) Serum total alkaline phosphatase is significantly elevated on first presentation. Concentrations gradually declined and returned to normal two years post-resection. (C) Serum 1,25(OH)2D is investigated in the fifth year and reported to be deficient. The effects of vitamin D supplementation are clearly visible post-resection when CYP27B1 is no longer inhibited by C-Terminal FGF23 produced by the tumour. (D) Serum C-Terminal FGF23 is investigated in the fifth year and reported to be significantly elevated. Tumour resection normalises C-Terminal FGF23. C-Terminal FGF23 now remains at the upper limit of the reference range. In all figures the dotted red lines represent the upper and lower limit of the reference range. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)
Serum biochemistry performed on a patient who presented five years earlier with bone pain, muscle weakness, low serum phosphate and elevated total alkaline phosphatase. Now in the fifth year he presented with “explosive” bone pain on physical contact and required the use of a wheelchair because of severe muscle weakness. Serum biochemistries were repeated with further investigations performed for 25(OH)D, 1,25(OH)2D, FGF23, adjusted calcium, creatinine and intact parathyroid hormone. Phosphate, total alkaline phosphatase, 1,25(OH)2D and C-Terminal FGF23 were abnormal (in red) leading to the suspicion of a paraneoplastic syndrome.
Overview of the sequencing output for control (CTRL) and PMT libraries. We show total number of reads obtained per sample, total number of accepted reads which did not contain unassigned nucleotides, total number of non-redundant reads and overall sample complexities (C) which is defined as the ratio of non-redundant to redundant reads. We also show the percentage of genome matching reads assigned to miRNAs and tRNA fragments.
| Total reads | Accepted reads | Adapter reads | Non-redundant reads | C | Genome match (%) | miRNA match (%) | tRNA match (%) | |
|---|---|---|---|---|---|---|---|---|
| PMT | 20,4513,66 | 15,231,963 | 14,959,567 | 535,957 | 0.035 | 73 | 44 | 38 |
| CTRL | 26,735,842 | 26,711,859 | 17,171,584 | 911,323 | 0.057 | 73 | 28 | 9 |
| CTRL | 14,090,445 | 14,077,678 | 10,211,115 | 741,722 | 0.079 | 71 | 13 | 14 |
| CTRL | 28,948,651 | 28,922,976 | 25,836,859 | 800,979 | 0.034 | 80 | 34 | 31 |
| CTRL | 26,936,015 | 26,911,371 | 24,367,300 | 811,143 | 0.034 | 84 | 15 | 39 |
| CTRL | 35,001,366 | 34,969,913 | 33,113,846 | 653,789 | 0.020 | 87 | 5 | 74 |
Fig. 3Bioinformatics and sequencing analysis of next generation sequencing data. PMT size class distribution for (A) redundant reads (B) non-redundant reads (C) complexities. The size class distribution of the redundant reads is a bimodal distribution with peaks at 22 nt (miRNAs) and 32 nt (tRNA fragments). We also observe a low complexity at 22 and 32 nt (miRNAs and tRNA fragments respectively) which indicates the presence of a small number of highly abundant small RNA reads. Abundance of differentially expressed miRNAs between the tumour (in red) compared to normal samples (in black). (D) miR-20b-5p (E) miR-21-5p (F) miR-144-5p (G) miR-197-3p (H) miR-335-5p. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)