Literature DB >> 28932544

The detectability of the pretreatment EGFR T790M mutations in lung adenocarcinoma using CAST-PCR and digital PCR.

Tsutomu Tatematsu1, Katsuhiro Okuda1, Ayumi Suzuki1, Risa Oda1, Tadashi Sakane1, Osamu Kawano1, Hiroshi Haneda1, Satoru Moriyama1, Hidefumi Sasaki1, Ryoichi Nakanishi1.   

Abstract

BACKGROUND: A gatekeeper T790M mutation is thought to cause resistance to epidermal growth factor receptor tyrosine kinase inhibitor (EGFR-TKI) treatment. The detection of a 2nd mutation is important for planning the next therapy when patients acquire resistance to the first line EGFR-TKI.
METHODS: We used a competitive allele-specific polymerase chain reaction (CAST-PCR) to analyze the incidence and clinical significance of T790M mutations in 153 lung adenocarcinomas with EGFR-activating mutations. To increase the sensitivity and specificity of the detection of T790M mutations, we subjected 20 of the 153 cases to a digital PCR. The genomic DNAs were extracted from frozen, surgically resected tumor tissue specimens.
RESULTS: The CAST-PCR detected T790M mutations in 45 (29.4%) of the 153 cases. The analytical sensitivity in the detection T790M mutations was 0.13-2.65% (average 0.27%, median 0.20%). In contrast, the digital PCR, detected T790M mutations in 8 (40%) out of 20 cases.
CONCLUSIONS: Our study shows that the pretreatment incidence of T790M mutation was less than that reported in previous studies. In order to clinically use pretreatment EGFR T790M mutation identification method, we should clarify the adequate methods and tissue preserved status.

Entities:  

Keywords:  CAST-PCR; EGFR mutation; Non-small cell lung cancer (NSCLC); T790M mutation; digital PCR

Year:  2017        PMID: 28932544      PMCID: PMC5594155          DOI: 10.21037/jtd.2017.07.02

Source DB:  PubMed          Journal:  J Thorac Dis        ISSN: 2072-1439            Impact factor:   2.895


  27 in total

1.  Usefulness of nanofluidic digital PCR arrays to quantify T790M mutation in EGFR-mutant lung adenocarcinoma.

Authors:  Kazutoshi Isobe; Yoshinobu Hata; Naobumi Tochigi; Kyohei Kaburaki; Hiroshi Kobayashi; Takashi Makino; Hajime Otsuka; Fumiaki Ishida; Nao Hirota; Go Sano; Keishi Sugino; Susumu Sakamoto; Yujiro Takai; Kazutoshi Shibuya; Akira Iyoda; Sakae Homma
Journal:  Cancer Genomics Proteomics       Date:  2015 Jan-Feb       Impact factor: 4.069

2.  Competitive allele specific TaqMan PCR for KRAS, BRAF and EGFR mutation detection in clinical formalin fixed paraffin embedded samples.

Authors:  Audrey Didelot; Delphine Le Corre; Armelle Luscan; Aurélie Cazes; Karine Pallier; Jean-François Emile; Pierre Laurent-Puig; Hélène Blons
Journal:  Exp Mol Pathol       Date:  2012-03-07       Impact factor: 3.362

3.  Biomarker analyses and final overall survival results from a phase III, randomized, open-label, first-line study of gefitinib versus carboplatin/paclitaxel in clinically selected patients with advanced non-small-cell lung cancer in Asia (IPASS).

Authors:  Masahiro Fukuoka; Yi-Long Wu; Sumitra Thongprasert; Patrapim Sunpaweravong; Swan-Swan Leong; Virote Sriuranpong; Tsu-Yi Chao; Kazuhiko Nakagawa; Da-Tong Chu; Nagahiro Saijo; Emma L Duffield; Yuri Rukazenkov; Georgina Speake; Haiyi Jiang; Alison A Armour; Ka-Fai To; James Chih-Hsin Yang; Tony S K Mok
Journal:  J Clin Oncol       Date:  2011-06-13       Impact factor: 44.544

4.  Accurate quantitation of JAK2 V617F allele burden by array-based digital PCR.

Authors:  E Kinz; A Leiherer; A H Lang; H Drexel; A Muendlein
Journal:  Int J Lab Hematol       Date:  2014-06-25       Impact factor: 2.877

5.  Pretreatment epidermal growth factor receptor (EGFR) T790M mutation predicts shorter EGFR tyrosine kinase inhibitor response duration in patients with non-small-cell lung cancer.

Authors:  Kang-Yi Su; Hsuan-Yu Chen; Ker-Chau Li; Min-Liang Kuo; James Chih-Hsin Yang; Wing-Kai Chan; Bing-Ching Ho; Gee-Chen Chang; Jin-Yuan Shih; Sung-Liang Yu; Pan-Chyr Yang
Journal:  J Clin Oncol       Date:  2012-01-03       Impact factor: 44.544

6.  Pretreatment EGFR T790M mutation and BRCA1 mRNA expression in erlotinib-treated advanced non-small-cell lung cancer patients with EGFR mutations.

Authors:  Rafael Rosell; Miguel Angel Molina; Carlota Costa; Sara Simonetti; Ana Gimenez-Capitan; Jordi Bertran-Alamillo; Clara Mayo; Teresa Moran; Pedro Mendez; Felipe Cardenal; Dolores Isla; Mariano Provencio; Manuel Cobo; Amelia Insa; Rosario Garcia-Campelo; Noemi Reguart; Margarita Majem; Santiago Viteri; Enric Carcereny; Ruth Porta; Bartomeu Massuti; Cristina Queralt; Itziar de Aguirre; Jose Miguel Sanchez; Maria Sanchez-Ronco; Jose Luis Mate; Aurelio Ariza; Susana Benlloch; Jose Javier Sanchez; Trever G Bivona; Charles L Sawyers; Miquel Taron
Journal:  Clin Cancer Res       Date:  2011-01-13       Impact factor: 12.531

Review 7.  Sequence artifacts in DNA from formalin-fixed tissues: causes and strategies for minimization.

Authors:  Hongdo Do; Alexander Dobrovic
Journal:  Clin Chem       Date:  2014-11-24       Impact factor: 8.327

Review 8.  Epidermal growth factor receptor tyrosine kinase inhibitor-resistant disease.

Authors:  Kadoaki Ohashi; Yosef E Maruvka; Franziska Michor; William Pao
Journal:  J Clin Oncol       Date:  2013-02-11       Impact factor: 44.544

9.  In vitro mutation artifacts after formalin fixation and error prone translesion synthesis during PCR.

Authors:  Nancy Quach; Myron F Goodman; Darryl Shibata
Journal:  BMC Clin Pathol       Date:  2004-02-12

10.  Highly sensitive and quantitative evaluation of the EGFR T790M mutation by nanofluidic digital PCR.

Authors:  Eiji Iwama; Koichi Takayama; Taishi Harada; Isamu Okamoto; Fumihiko Ookubo; Junji Kishimoto; Eishi Baba; Yoshinao Oda; Yoichi Nakanishi
Journal:  Oncotarget       Date:  2015-08-21
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  3 in total

1.  Prognostic impact of pretreatment T790M mutation on outcomes for patients with resected, EGFR-mutated, non-small cell lung cancer.

Authors:  Yoshiya Matsumoto; Tomoya Kawaguchi; Masaru Watanabe; Shun-Ichi Isa; Masahiko Ando; Akihiro Tamiya; Akihito Kubo; Chiyoe Kitagawa; Naoki Yoshimoto; Yasuhiro Koh
Journal:  BMC Cancer       Date:  2022-07-15       Impact factor: 4.638

2.  Highly Sensitive Droplet Digital PCR Method for Detection of de novo EGFR T790M Mutation in Patients with Non-Small Cell Lung Cancer.

Authors:  Xun Wang; Xiao Li; Haifa Guo; Lingxiang Zhu; Zhiyong Peng; Jun Wang; Fan Yang; Yong Guo
Journal:  Onco Targets Ther       Date:  2020-10-22       Impact factor: 4.147

3.  Technical Validation and Clinical Implications of Ultrasensitive PCR Approaches for EGFR-Thr790Met Mutation Detection in Pretreatment FFPE Samples and in Liquid Biopsies from Non-Small Cell Lung Cancer Patients.

Authors:  Javier Simarro; Gema Pérez-Simó; Nuria Mancheño; Emilio Ansotegui; Carlos Francisco Muñoz-Núñez; José Gómez-Codina; Óscar Juan; Sarai Palanca
Journal:  Int J Mol Sci       Date:  2022-07-31       Impact factor: 6.208

  3 in total

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