| Literature DB >> 28932482 |
Trung Vu Quoc1, Linh Nguyen Ngoc1, Vy Do Truc1, Linh Duong Khanh1, Hung Ha Manh2, Chien Thang Pham3, Luc Van Meervelt4.
Abstract
In the title compound, C7H8N4S2, the thio-phene ring shows rotational disorder over two orientations in a 0.6957 (15):0.3043 (15) ratio. The plane of the 1,2,4-triazole ring makes a dihedral angle of 75.02 (17)° with the major-disorder component of the thiophene ring. In the crystal, two types of inversion dimers, described by the graph-set motifs R22(8) and R22(10), are formed by N-H⋯S inter-actions. Chains of mol-ecules running in the [101] direction are linked by weaker N-H⋯N inter-actions. The thio-phene ring is involved in π-π and C-H⋯π inter-actions.Entities:
Keywords: 1,2,4-triazole-3-thione; crystal structure; disorder; polythiophene; thiophene
Year: 2017 PMID: 28932482 PMCID: PMC5588588 DOI: 10.1107/S2056989017012191
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1A view of the asymmetric unit of the title compound, showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 50% probability level. H atoms are shown as small circles of arbitrary radii. The minor component of the disordered thiophene rings is shown in pale yellow.
Figure 2Crystal packing of the title compound shown in projection down the a axis.
Figure 3Part of the crystal packing of the title compound, showing the rings of graph-set motif (8) and (10) formed by N—H⋯S hydrogen-bond interactions [see Table 1 ▸; symmetry codes: (i) −x, −y + 2, −z + 1; (ii) −x + 1, −y + 2, −z + 1; (iii) x + , −y + , z + ] and a chain of graph-set motif C(5).
Hydrogen-bond geometry (Å, °)
Cg3 is the centroid of the N2/N3/N4/C6/C7 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.909 (15) | 2.622 (15) | 3.3847 (13) | 142.0 (12) |
| N1—H1 | 0.849 (17) | 2.628 (16) | 3.4163 (9) | 154.9 (13) |
| N4—H4⋯S2iii | 0.890 (16) | 2.395 (15) | 3.2847 (9) | 178.2 (12) |
| C1 | 0.95 | 2.78 | 3.503 (11) | 134 |
Symmetry codes: (i) ; (ii) ; (iii) , ; (iv) .
Figure 4Part of the crystal packing of the title compound, showing the π–π stacking interactions between the thiophene (yellow) and 1,2,4-triazole (blue) rings (only the major component of the disordered thiophene ring is shown).
Figure 5Hirshfeld surface for title compound mapped over d norm over the range −0.436 to 1.179 a.u., highlighting (a) the N—H⋯S hydrogen bonding and (b) the N—H⋯N and C—H⋯N interactions.
Figure 6Reaction scheme for the title compound.
Experimental details
| Crystal data | |
| Chemical formula | C7H8N4S2 |
|
| 212.29 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 100 |
|
| 7.6904 (4), 13.0429 (7), 9.0220 (4) |
| β (°) | 90.081 (2) |
|
| 904.95 (8) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.54 |
| Crystal size (mm) | 0.32 × 0.20 × 0.08 |
| Data collection | |
| Diffractometer | Bruker APEXII CCD |
| Absorption correction | Multi-scan ( |
|
| 0.710, 0.746 |
| No. of measured, independent and observed [ | 27159, 2784, 2536 |
|
| 0.025 |
| (sin θ/λ)max (Å−1) | 0.718 |
| Refinement | |
|
| 0.027, 0.071, 1.05 |
| No. of reflections | 2784 |
| No. of parameters | 143 |
| No. of restraints | 20 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.43, −0.35 |
Computer programs: APEX2 (Bruker, 2014 ▸), SAINT (Bruker, 2013 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).
| C7H8N4S2 | |
| Monoclinic, | Mo |
| Cell parameters from 9996 reflections | |
| θ = 3.1–30.7° | |
| µ = 0.54 mm−1 | |
| β = 90.081 (2)° | |
| Block, colorless | |
| 0.32 × 0.20 × 0.08 mm |
| Bruker APEXII CCD diffractometer | 2536 reflections with |
| φ and ω scans | |
| Absorption correction: multi-scan (SADABS; Bruker, 2014) | θmax = 30.7°, θmin = 2.8° |
| 27159 measured reflections | |
| 2784 independent reflections |
| Refinement on | 20 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 2784 reflections | Δρmax = 0.43 e Å−3 |
| 143 parameters | Δρmin = −0.35 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Occ. (<1) | |||||
| S1A | 0.63885 (12) | 0.92996 (9) | −0.14786 (11) | 0.02217 (15) | 0.6957 (15) |
| C1A | 0.7802 (4) | 0.9045 (2) | 0.0018 (3) | 0.0237 (6) | 0.6957 (15) |
| H1A | 0.894252 | 0.931612 | 0.011838 | 0.028* | 0.6957 (15) |
| C2A | 0.7019 (5) | 0.8398 (5) | 0.1017 (6) | 0.0164 (5) | 0.6957 (15) |
| H2A | 0.755868 | 0.816279 | 0.190184 | 0.020* | 0.6957 (15) |
| S1B | 0.7968 (3) | 0.92242 (15) | −0.0160 (2) | 0.02217 (15) | 0.3043 (15) |
| C1B | 0.6169 (13) | 0.9240 (9) | −0.1362 (11) | 0.0237 (6) | 0.3043 (15) |
| H1B | 0.606846 | 0.962783 | −0.224912 | 0.028* | 0.3043 (15) |
| C2B | 0.4838 (15) | 0.8542 (12) | −0.0748 (15) | 0.0164 (5) | 0.3043 (15) |
| H2B | 0.376467 | 0.840204 | −0.122989 | 0.020* | 0.3043 (15) |
| C3 | 0.52961 (13) | 0.81192 (7) | 0.05711 (11) | 0.01448 (18) | |
| C4A | 0.4817 (8) | 0.8574 (6) | −0.0767 (6) | 0.0211 (5) | 0.6957 (15) |
| H4A | 0.371471 | 0.847945 | −0.122328 | 0.025* | 0.6957 (15) |
| C4B | 0.6897 (15) | 0.8412 (12) | 0.1007 (13) | 0.0211 (5) | 0.3043 (15) |
| H4B | 0.739939 | 0.817943 | 0.190900 | 0.025* | 0.3043 (15) |
| C5 | 0.40813 (13) | 0.74501 (8) | 0.14692 (11) | 0.01518 (18) | |
| H5A | 0.330663 | 0.706410 | 0.079246 | 0.018* | |
| H5B | 0.476853 | 0.694874 | 0.204932 | 0.018* | |
| C6 | 0.30116 (12) | 0.80879 (7) | 0.24957 (10) | 0.01347 (17) | |
| N3 | 0.14624 (11) | 0.84574 (7) | 0.22259 (9) | 0.01560 (16) | |
| N4 | 0.10978 (11) | 0.90487 (7) | 0.34611 (9) | 0.01478 (16) | |
| H4 | 0.011 (2) | 0.9399 (12) | 0.3552 (18) | 0.030 (4)* | |
| C7 | 0.23720 (12) | 0.90463 (7) | 0.44686 (10) | 0.01315 (17) | |
| N2 | 0.36064 (10) | 0.84243 (6) | 0.38483 (9) | 0.01294 (15) | |
| S2 | 0.25221 (3) | 0.96465 (2) | 0.61239 (3) | 0.01586 (7) | |
| N1 | 0.52086 (11) | 0.81396 (7) | 0.44672 (10) | 0.01611 (17) | |
| H1C | 0.5008 (19) | 0.7808 (12) | 0.5337 (17) | 0.023 (4)* | |
| H1D | 0.576 (2) | 0.8692 (13) | 0.4631 (17) | 0.028 (4)* |
| S1A | 0.0285 (3) | 0.0166 (2) | 0.0214 (2) | 0.0005 (2) | 0.0079 (2) | 0.00146 (16) |
| C1A | 0.0256 (11) | 0.0213 (13) | 0.0241 (12) | 0.0030 (9) | −0.0027 (9) | 0.0011 (8) |
| C2A | 0.0091 (10) | 0.0171 (9) | 0.0229 (9) | −0.0038 (9) | 0.0006 (7) | −0.0041 (7) |
| S1B | 0.0285 (3) | 0.0166 (2) | 0.0214 (2) | 0.0005 (2) | 0.0079 (2) | 0.00146 (16) |
| C1B | 0.0256 (11) | 0.0213 (13) | 0.0241 (12) | 0.0030 (9) | −0.0027 (9) | 0.0011 (8) |
| C2B | 0.0091 (10) | 0.0171 (9) | 0.0229 (9) | −0.0038 (9) | 0.0006 (7) | −0.0041 (7) |
| C3 | 0.0150 (4) | 0.0134 (4) | 0.0151 (4) | 0.0023 (3) | 0.0032 (3) | −0.0021 (3) |
| C4A | 0.0270 (10) | 0.0233 (12) | 0.0131 (8) | 0.0096 (8) | 0.0020 (7) | 0.0019 (7) |
| C4B | 0.0270 (10) | 0.0233 (12) | 0.0131 (8) | 0.0096 (8) | 0.0020 (7) | 0.0019 (7) |
| C5 | 0.0145 (4) | 0.0144 (4) | 0.0167 (4) | −0.0002 (3) | 0.0023 (3) | −0.0024 (3) |
| C6 | 0.0131 (4) | 0.0131 (4) | 0.0142 (4) | −0.0012 (3) | 0.0011 (3) | 0.0001 (3) |
| N3 | 0.0140 (4) | 0.0182 (4) | 0.0146 (4) | 0.0010 (3) | 0.0005 (3) | −0.0022 (3) |
| N4 | 0.0124 (4) | 0.0169 (4) | 0.0151 (4) | 0.0027 (3) | 0.0001 (3) | −0.0015 (3) |
| C7 | 0.0122 (4) | 0.0127 (4) | 0.0145 (4) | 0.0002 (3) | 0.0019 (3) | 0.0020 (3) |
| N2 | 0.0105 (3) | 0.0146 (4) | 0.0138 (3) | 0.0015 (3) | 0.0000 (3) | 0.0007 (3) |
| S2 | 0.01442 (12) | 0.01893 (13) | 0.01423 (12) | 0.00179 (8) | −0.00036 (8) | −0.00250 (8) |
| N1 | 0.0113 (4) | 0.0190 (4) | 0.0181 (4) | 0.0018 (3) | −0.0029 (3) | 0.0020 (3) |
| S1Aa—C1A | 1.763 (4) | C3—C4B | 1.347 (10) |
| C1Aa—H1A | 0.9500 | C3—C5 | 1.5143 (14) |
| C1Aa—C2A | 1.375 (5) | C5—H5A | 0.9900 |
| C2Aa—H2A | 0.9500 | C5—H5B | 0.9900 |
| S1Bb—C1B | 1.757 (11) | C5—C6 | 1.4929 (13) |
| C1Bb—H1B | 0.9500 | C6—N3 | 1.3077 (13) |
| C1Bb—C2B | 1.478 (12) | C6—N2 | 1.3745 (12) |
| C2Bb—H2B | 0.9500 | N3—N4 | 1.3842 (11) |
| C2Aa—C3 | 1.431 (3) | N4—H4 | 0.889 (17) |
| C2Bb—C3 | 1.357 (11) | N4—C7 | 1.3356 (12) |
| S1Aa—C4A | 1.665 (5) | C7—N2 | 1.3689 (12) |
| C4Aa—H4A | 0.9500 | C7—S2 | 1.6900 (10) |
| S1Bb—C4B | 1.707 (11) | N2—N1 | 1.4021 (11) |
| C4Bb—H4B | 0.9500 | N1—H1C | 0.909 (15) |
| C3—C4A | 1.394 (5) | N1—H1D | 0.849 (17) |
| C2Aa—C1Aa—S1A | 110.3 (3) | C3—C2Bb—H2B | 123.2 |
| C4Aa—S1Aa—C1A | 92.56 (19) | C3—C5—H5B | 109.5 |
| C2Aa—C1Aa—H1A | 124.8 | H5A—C5—H5B | 108.1 |
| S1Aa—C1Aa—H1A | 124.8 | C3—C4Aa—H4A | 123.7 |
| C1Aa—C2Aa—H2A | 123.9 | C3—C4Bb—H4B | 122.0 |
| C2Bb—C1Bb—S1B | 107.9 (7) | C6—C5—C3 | 110.59 (8) |
| C4Bb—S1Bb—C1B | 90.4 (5) | C6—C5—H5A | 109.5 |
| S1Bb—C1Bb—H1B | 126.1 | C6—C5—H5B | 109.5 |
| C2Bb—C1Bb—H1B | 126.1 | N3—C6—C5 | 126.34 (9) |
| C1Bb—C2Bb—H2B | 123.2 | N3—C6—N2 | 110.46 (8) |
| C1Aa—C2Aa—C3 | 112.2 (3) | N2—C6—C5 | 123.07 (9) |
| S1Aa—C4Aa—H4A | 123.7 | C6—N3—N4 | 103.94 (8) |
| S1Bb—C4Bb—H4B | 122.0 | N3—N4—H4 | 122.3 (11) |
| C4Aa—C3—C2A | 112.3 (3) | C7—N4—N3 | 113.41 (8) |
| C4Bb—C3—C2B | 112.1 (6) | C7—N4—H4 | 124.3 (11) |
| C4Aa—C3—C5 | 123.1 (2) | N4—C7—N2 | 103.39 (8) |
| C2Aa—C3—C5 | 124.6 (2) | N4—C7—S2 | 130.50 (8) |
| C2Bb—C3—C5 | 122.9 (4) | N2—C7—S2 | 126.10 (7) |
| C4Bb—C3—C5 | 124.8 (4) | C6—N2—N1 | 124.07 (8) |
| C3—C5—H5A | 109.5 | C7—N2—C6 | 108.79 (8) |
| C3—C4Aa—S1A | 112.6 (3) | C7—N2—N1 | 127.13 (8) |
| C3—C2Aa—H2A | 123.9 | N2—N1—H1C | 108.7 (9) |
| C3—C4Bb—S1B | 115.9 (7) | N2—N1—H1D | 106.5 (11) |
| C3—C2Bb—C1B | 113.6 (7) | H1C—N1—H1D | 109.7 (14) |
| C4Aa—S1Aa—C1Aa—C2Aa | 0.5 (5) | C2Aa—C3—C5—C6 | 89.6 (3) |
| S1Aa—C1Aa—C2Aa—C3 | −0.2 (6) | C3—C5—C6—N3 | 93.21 (12) |
| C4Bb—S1Bb—C1Bb—C2Bb | −2.2 (12) | C3—C5—C6—N2 | −82.26 (11) |
| S1Bb—C1Bb—C2Bb—C3 | 2.7 (17) | N2—C6—N3—N4 | 0.31 (11) |
| C1Bb—C2Bb—C3—C4Bb | −1.8 (18) | C5—C6—N3—N4 | −175.64 (9) |
| C1Bb—C2Bb—C3—C5 | 174.8 (8) | C6—N3—N4—C7 | −0.17 (11) |
| C1Aa—C2Aa—C3—C4Aa | −0.3 (6) | N3—N4—C7—N2 | −0.04 (11) |
| C1Aa—C2Aa—C3—C5 | −177.5 (3) | N3—N4—C7—S2 | 179.78 (8) |
| C2Aa—C3—C4Aa—S1Aa | 0.7 (7) | N4—C7—N2—C6 | 0.23 (10) |
| C5—C3—C4Aa—S1Aa | 178.0 (2) | S2—C7—N2—C6 | −179.61 (7) |
| C1Aa—S1Aa—C4Aa—C3 | −0.7 (5) | N4—C7—N2—N1 | −178.40 (9) |
| C2Bb—C3—C4Bb—S1Bb | 0.0 (16) | S2—C7—N2—N1 | 1.77 (14) |
| C5—C3—C4Bb—S1Bb | −176.6 (5) | N3—C6—N2—C7 | −0.36 (11) |
| C1Bb—S1Bb—C4Bb—C3 | 1.4 (12) | C5—C6—N2—C7 | 175.75 (9) |
| C4Bb—C3—C5—C6 | 87.4 (9) | N3—C6—N2—N1 | 178.32 (9) |
| C2Bb—C3—C5—C6 | −88.8 (10) | C5—C6—N2—N1 | −5.57 (14) |
| C4Aa—C3—C5—C6 | −87.3 (4) |
| H··· | ||||
| N1—H1 | 0.909 (15) | 2.622 (15) | 3.3847 (13) | 142.0 (12) |
| N1—H1 | 0.849 (17) | 2.628 (16) | 3.4163 (9) | 154.9 (13) |
| N4—H4···S2iii | 0.890 (16) | 2.395 (15) | 3.2847 (9) | 178.2 (12) |
| C1 | 0.95 | 2.78 | 3.503 (11) | 134 |