Literature DB >> 28930454

Chemical Bypass of General Base Catalysis in Hedgehog Protein Cholesterolysis Using a Hyper-Nucleophilic Substrate.

Daniel A Ciulla1, Michael T Jorgensen2, José-Luis Giner2, Brian P Callahan1.   

Abstract

Proteins in the hedgehog family undergo self-catalyzed endoproteolysis involving nucleophilic attack by a molecule of cholesterol. Recently, a conserved aspartate residue (D303, or D46) of hedgehog was identified as the general base that activates cholesterol during this unusual autoprocessing event; mutation of the catalyzing functional group (D303A) reduces activity by >104-fold. Here we report near total rescue of this ostensibly dead general base mutant by a synthetic substrate, 3β-hydroperoxycholestane (3HPC) in which the sterol -OH group is replaced by the hyper nucleophilic -OOH group. Other hedgehog point mutants at D303, also unreactive with cholesterol, accepted 3HPC as a substrate with the rank order: WT > D303A ≈ D303N ≫ D303R, D303E. We attribute the revived activity with 3-HPC to the α-effect, where tandem electronegative atoms exhibit exceptionally high nucleophilicity despite relatively low basicity.

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Year:  2017        PMID: 28930454      PMCID: PMC6054137          DOI: 10.1021/jacs.7b05161

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

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Authors:  Randall K Mann; Philip A Beachy
Journal:  Annu Rev Biochem       Date:  2004       Impact factor: 23.643

2.  Crystal structure of a Hedgehog autoprocessing domain: homology between Hedgehog and self-splicing proteins.

Authors:  T M Hall; J A Porter; K E Young; E V Koonin; P A Beachy; D J Leahy
Journal:  Cell       Date:  1997-10-03       Impact factor: 41.582

3.  Direct Brønsted analysis of the restoration of activity to a mutant enzyme by exogenous amines.

Authors:  M D Toney; J F Kirsch
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4.  Reactivity of intein thioesters: appending a functional group to a protein.

Authors:  Jeet Kalia; Ronald T Raines
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5.  Evaluation of the Catalytic Contribution from a Positioned General Base in Ketosteroid Isomerase.

Authors:  Vandana Lamba; Filip Yabukarski; Margaux Pinney; Daniel Herschlag
Journal:  J Am Chem Soc       Date:  2016-07-27       Impact factor: 15.419

6.  Major contribution of a carboxymethyl group to transition-state stabilization by cytidine deaminase: mutation and rescue.

Authors:  D C Carlow; A A Smith; C C Yang; S A Short; R Wolfenden
Journal:  Biochemistry       Date:  1995-04-04       Impact factor: 3.162

7.  Förster resonance energy transfer-based cholesterolysis assay identifies a novel hedgehog inhibitor.

Authors:  Timothy S Owen; George Ngoje; Travis J Lageman; Brandon M Bordeau; Marlene Belfort; Brian P Callahan
Journal:  Anal Biochem       Date:  2015-06-18       Impact factor: 3.365

8.  How does a symmetric dimer recognize an asymmetric substrate? A substrate complex of HIV-1 protease.

Authors:  M Prabu-Jeyabalan; E Nalivaika; C A Schiffer
Journal:  J Mol Biol       Date:  2000-09-01       Impact factor: 5.469

9.  A Single Aspartate Coordinates Two Catalytic Steps in Hedgehog Autoprocessing.

Authors:  Jian Xie; Timothy Owen; Ke Xia; Brian Callahan; Chunyu Wang
Journal:  J Am Chem Soc       Date:  2016-08-19       Impact factor: 15.419

10.  Cholesterol modification of hedgehog signaling proteins in animal development.

Authors:  J A Porter; K E Young; P A Beachy
Journal:  Science       Date:  1996-10-11       Impact factor: 47.728

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  6 in total

1.  Subverting Hedgehog Protein Autoprocessing by Chemical Induction of Paracatalysis.

Authors:  Carl J Smith; Andrew G Wagner; Robert T Stagnitta; Zihan Xu; John L Pezzullo; José-Luis Giner; Jian Xie; Douglas F Covey; Chunyu Wang; Brian P Callahan
Journal:  Biochemistry       Date:  2020-02-04       Impact factor: 3.162

2.  Protein-Nucleic Acid Conjugation with Sterol Linkers Using Hedgehog Autoprocessing.

Authors:  Xiaoyu Zhang; Zihan Xu; Dina S Moumin; Daniel A Ciulla; Timothy S Owen; Rebecca A Mancusi; José-Luis Giner; Chunyu Wang; Brian P Callahan
Journal:  Bioconjug Chem       Date:  2019-10-10       Impact factor: 4.774

Review 3.  Hedgehog Autoprocessing: From Structural Mechanisms to Drug Discovery.

Authors:  Nabin Kandel; Chunyu Wang
Journal:  Front Mol Biosci       Date:  2022-05-20

4.  Genetically Encoded Cholesterol-Modified Polypeptides.

Authors:  Davoud Mozhdehi; Kelli M Luginbuhl; Michael Dzuricky; Simone A Costa; Sinan Xiong; Fred C Huang; Mae M Lewis; Stephanie R Zelenetz; Christian D Colby; Ashutosh Chilkoti
Journal:  J Am Chem Soc       Date:  2019-01-04       Impact factor: 15.419

5.  Engineering the Architecture of Elastin-Like Polypeptides: From Unimers to Hierarchical Self-Assembly.

Authors:  Soumen Saha; Samagya Banskota; Stefan Roberts; Nadia Kirmani; Ashutosh Chilkoti
Journal:  Adv Ther (Weinh)       Date:  2020-02-03

6.  Nanomolar, Noncovalent Antagonism of Hedgehog Cholesterolysis: Exception to the "Irreversibility Rule" for Protein Autoprocessing Inhibition.

Authors:  Andrew G Wagner; Robert T Stagnitta; Zihan Xu; John L Pezzullo; Nabin Kandel; José-Luis Giner; Douglas F Covey; Chunyu Wang; Brian P Callahan
Journal:  Biochemistry       Date:  2021-12-23       Impact factor: 3.321

  6 in total

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