Literature DB >> 28927534

Alternative RNA splicing and gastric cancer.

Ying Li1, Yuan Yuan2.   

Abstract

Alternative splicing (AS) linked to diseases, especially to tumors. Recently, more and more studies focused on the relationship between AS and gastric cancer (GC). This review surveyed the hot topic from four aspects: First, the common types of AS in cancer, including exon skipping, intron retention, mutually exclusive exon, alternative 5 ' or 3' splice site, alternative first or last exon and alternative 3' untranslated regions. Second, basic mechanisms of AS and its relationship with cancer. RNA splicing in eukaryotes follows the GT-AG rule by both cis-elements and trans-acting factors regulatory. Through RNA splicing, different proteins with different forms and functions can be produced and may be associated with carcinogenesis. Third, AS types of GC-related genes and their splicing variants. In this paper, we listed 10 common genes with AS and illustrated its possible molecular mechanisms owing to genetic variation (mutation and /or polymorphism). Fourth, the splicing variants of GC-associated genes and gastric carcinogenesis, invasion and metastasis. Many studies have found that the different splicing variants of the same gene are differentially expressed in GC and its precancerous diseases, suggesting AS has important implications in GC development. Taking together, this review highlighted the role of AS and splicing variants in the process of GC. We hope that this is not only beneficial to advances in the study field of GC, but also can provide valuable information to other similar tumor research.Although we already know some gene splicing and splicing variants play an important role in the development of GC, but many phenomena and mechanisms are still unknown. For example, how the tumor microenvironment and signal transduction pathway effect the forming and function of AS? Unfortunately, this review did not cover the contents because the current study is limited. It is no doubt that clarifying the phenomena and mechanisms of these unknown may help to reveal the relationship of AS with complex tumor genetic variation and the occurrence and development of tumors.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Alternative splicing; Alternative splicing variants; Gastric cancer

Mesh:

Substances:

Year:  2016        PMID: 28927534     DOI: 10.1016/j.mrrev.2016.07.011

Source DB:  PubMed          Journal:  Mutat Res Rev Mutat Res        ISSN: 1383-5742            Impact factor:   5.657


  16 in total

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Journal:  J Med Genet       Date:  2019-02-11       Impact factor: 6.318

2.  Alterations of RNA splicing patterns in esophagus squamous cell carcinoma.

Authors:  Jiyu Ding; Chunquan Li; Yinwei Cheng; Zepeng Du; Qiuyu Wang; Zhidong Tang; Chao Song; Qiaoxi Xia; Wenjing Bai; Ling Lin; Wei Liu; Liyan Xu; Enmin Li; Bingli Wu
Journal:  Cell Biosci       Date:  2021-02-09       Impact factor: 7.133

3.  Identification of potential biomarkers and their clinical significance in gastric cancer using bioinformatics analysis methods.

Authors:  Jie Liu; Miao Zhou; Yangyang Ouyang; Laifeng Du; Lingbo Xu; Hongyun Li
Journal:  PeerJ       Date:  2020-07-14       Impact factor: 2.984

4.  Integrative bioinformatics analysis of prognostic alternative splicing signatures in gastric cancer.

Authors:  Zhen Zong; Hui Li; Zhikun Ning; Cegui Hu; Fuxin Tang; Xiaojian Zhu; Huakai Tian; Taicheng Zhou; He Wang
Journal:  J Gastrointest Oncol       Date:  2020-08

5.  SNPs in lncRNA Regions and Breast Cancer Risk.

Authors:  Maija Suvanto; Jonathan Beesley; Carl Blomqvist; Georgia Chenevix-Trench; Sofia Khan; Heli Nevanlinna
Journal:  Front Genet       Date:  2020-06-30       Impact factor: 4.599

6.  PUF60 accelerates the progression of breast cancer through downregulation of PTEN expression.

Authors:  Dongying Sun; Wei Lei; Xiaodong Hou; Hui Li; Wenlu Ni
Journal:  Cancer Manag Res       Date:  2019-01-17       Impact factor: 3.989

7.  KRT18 Modulates Alternative Splicing of Genes Involved in Proliferation and Apoptosis Processes in Both Gastric Cancer Cells and Clinical Samples.

Authors:  Biao Chen; Ximing Xu; Dan-Dan Lin; Xin Chen; Yang-Tao Xu; Xin Liu; Wei-Guo Dong
Journal:  Front Genet       Date:  2021-07-05       Impact factor: 4.599

Review 8.  The Function of Pre-mRNA Alternative Splicing in Mammal Spermatogenesis.

Authors:  Huibin Song; Ling Wang; Dake Chen; Fenge Li
Journal:  Int J Biol Sci       Date:  2020-01-01       Impact factor: 6.580

9.  Comprehensive Analysis of Alternative Splicing Signature in Gastric Cancer Prognosis Based on The Cancer Genome Atlas (TCGA) and SpliceSeq Databases.

Authors:  Xiaohu Cheng; Xianghua Li; Yimei Gu; Lianbang Zhou; Jingjing Tang; Xiang Dai; Heng Jiang; Yang Huang; Yingfeng Zhang; Tongtong Xu; Zhining Liu; Qihong Zhao
Journal:  Med Sci Monit       Date:  2020-11-21

10.  Identification and validation of critical alternative splicing events and splicing factors in gastric cancer progression.

Authors:  Haoran Feng; Zhijian Jin; Kun Liu; Yi Peng; Songyao Jiang; Changgang Wang; Jiele Hu; Xiaoyun Shen; Weihua Qiu; Xi Cheng; Ren Zhao
Journal:  J Cell Mol Med       Date:  2020-09-16       Impact factor: 5.310

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