LAPTM4B*2 allele is associated with the development of papillary thyroid carcinoma in Chinese women.

Lysosome-associated protein transmembrane 4-β (LAPTM4B) contains a polymorphic region that contributes to the increased risk of numerous types of tumor. However, no study has yet demonstrated an association between the expression of the LAPTM4B gene and tumor differentiation, and the reason that LAPTM4B polymorphisms affect the susceptibility of individuals to cancer remains to be elucidated. The present study assessed the possible association between LAPTM4B polymorphism and the risk of papillary thyroid carcinoma (PTC), and attempted to identify the underlying mechanism for variation in patient susceptibility with respect to transcription regulation in the polymorphism region. The case control study included 183 papillary thyroid carcinoma patients (132 females, 51 males) and 697 healthy controls (249 females, 448 males). Genomic DNA was extracted from the blood and the genotype of LAPTM4B was identified using polymerase chain reaction (PCR). The results of the PCR revealed that LAPTM4B allele *2 was associated with PTC risk in comparison with LAPTM4B allele *1 [odds ratio (OR), 1.968; 95% confidence interval (CI), 1.363-2.841, P<0.001] in females, while LAPTM4B*2 was not associated with PTC risk in males (OR, 0.996, 95% CI, 0.615-1.612, P=0.986). Notably, LAPTM4B polymorphism was not associated with clinical parameters in the female patient group. In addition, by performing a luciferase reporter assay in the PTC TPC1 and B-CPAP cell lines, the transcriptional activity of the +10/+311 plasmid, representing LAPTM4B*2 was reduced compared with that of the +10/+292 plasmid representing LAPTM4B*1. In conclusion, the results of the present study suggested that LAPTM4B*2 was a susceptibility factor for PTC in the female Chinese population and this may not be caused by the transcriptional regulation of LAPTM4B polymorphism region in TPC1 and B-CPAP cell lines.

Introduction

The incidence of thyroid carcinoma has increased rapidly over the past 3 decades (1). However, the reason for this increase in incidence remains to be elucidated (2). Certain studies have reported that this increase may be due to the high detection rate resulting from the increasing prevalence of thyroid ultrasonography and subsequent fine-needle aspiration cytology (3–5). A previous study suggested that the number of teenagers (<20 years) with the disease, in which screening for thyroid carcinoma is not performed, is increasing (6). Papillary thyroid carcinoma (PTC) is the primary subtype of thyroid cancer that has contributed to this increased incidence globally. The etiological factors for the development of papillary thyroid carcinoma include exogenous factors, including radiation exposure, high iodine intake, Hashimoto's thyroiditis and obesity, and endogenous factors, such as certain gene mutations that have been demonstrated to serve a key role in progression of thyroid tumorigenesis (7–9). The incidence of PTC in females is more than twice than in males, which may be due to the fact that estrogen may promote the proliferation of thyroid carcinoma cells (10). Although there have been a number of hypotheses regarding thyroid tumorigenesis, further study is required.

Lysosomal protein transmembrane 4-β (LAPTM4B) is typically highly expressed in hepatocellular carcinoma in comparison with normal liver cells (11). LAPTM4B is located on chromosome 8q22.1 and includes 7 exons and 6 introns (12). In total two alleles of LAPTM4B have been identified, termed LAPTM4B*1 allele and LAPTM4B*2 allele (12). The difference between these alleles is that LAPTM4B*2 has an extra 19 base pairs (bp) sequence arranged in tandem at the 5′untranslated region (UTR) in exon 1 (12). The two alleles generate three potential genotypes: LAPTM4B*1/1; LAPTM4B*1/2; LAPTM4B*2/2 (12).

Previous studies have established that LAPTM4B gene polymorphism is associated with tumor susceptibility; notably, LAPTM4B*2 is associated with a high risk of breast (13), stomach (14), lung (15), colon (16), endometrial (17), cervical (18), gall bladder (19), ovarian cancer and melanoma (20,21). Nevertheless, no significant difference in the frequency of LAPTM4B*2 is observed in patients with nasopharyngeal carcinoma and esophageal carcinoma, compared with corresponding controls (16,22). These results suggest that LAPTM4B*2 may be specifically associated with susceptibility to certain tumors. Papillary thyroid carcinoma is a well-differentiated carcinoma that has not yet been associated with LAPTM4B gene polymorphism. Therefore, in the present study, a case-control assay was performed to assess LAPTM4B gene polymorphism association with susceptibility to PTC in the female Chinese population. A dual-luciferase reporter assay was also performed in two types of thyroid papillary cells to assess the transcriptional activity of LAPTM4B*1 compared with LAPTM4B*2.

Materials and methods

Patients and tissue samples

Blood samples were collected in EDTA-containing tubes from 183 patients with PTC who underwent surgical resection at Beijing Cancer Hospital Affiliated with Peking University (Beijing, China) from April 2015 to September 2015 and frozen at −20°C. Each patient provided informed consent for participation in the present study. Tumor-Node-Metastasis (TNM) staging was performed by Yue Meng for each patient following standard TNM guidelines (23). Clinicopathological characteristics that were evaluated included sex, age, tumor size, tumor location, body mass index (BMI), tumor invasive condition and central lymph node status. The clinicopathological features of female patients also included menopause and the number of pregnancies. The data of healthy control patients was obtained from previously published studies by Cheng et al (16) and Liu et al (14) and the consent for these data was obtained at the time of initial data retrieval.

DNA extraction and polymerase chain reaction (PCR)

Frozen blood samples were thawed in a water bath at room temperature and genomic DNA was extracted from 600 µl of each blood sample using a DNA extraction kit (Tiangen Biotech Co., Beijing, China; cat. no., DP304-03), according to the manufacturer's protocol. For each sample, the genotype of LAPTM4B was identified by PCR, using the following primers: forward, 5′-GCCGACTAGGGGACTGGCGGA-3′; and reverse, 5′-CGAGAGCTCCGAGCTTCTGCC-3′. The PCR mixture (25 µl) contained 2X PCR Taq mix (12.5 µl; KT-201; Tiangen Biotech Co., Beijing, China), 1 µl template DNA at final concentration 100 ng/µl, 0.5 µl β-actin forward primer at a final concentration 5 µM, 0.5 µl β-actin reverse primer at a final concentration 5 µM, 1 µl LAPTM4B forward primer at a final concentration 10 µM, 1 µl LAPTM4B reverse primer at a final concentration 10 µM and 9.5 µl ddH2O.0.5 U Taq polymerase (Tiangen Biotech Co.) and 1 µl template DNA at a final concentration 100 ng/µl. Human β-actin was used as an internal positive control using the following primers: Forward, 5′-TCACCAACTGGGACGACAT-3′; and reverse, 5′-AGGTAGTCAGTCAGGTCCCG-3′. The PCR conditions were 95°C denaturation for 5 min, 30 cycles of 30 sec each at 94°C, 30 sec at 64.1°C and 30 sec at 72°C, followed by extension at 72°C for 5 min. The PCR products were analyzed by electrophoresis using a 2.5% agarose gel and visualized with ethidium bromide. The LAPTM4B*1/1 genotype produced a 204 bp band, the LAPTM4B*2/2 genotype produced a 223 bp band. The LAPTM4B*1/2 genotype produced 204 and 223-bp bands. The products of PCR were sent to SBS Genetech Co., Ltd (Beijing, China) for sequencing.

Cells and culture conditions

Human PTC TPC-1 and B-CPAP cell lines, were maintained in RPMI-1640 medium (Gibco; Thermo Fisher Scientific, Inc., Waltham, MA, USA) supplemented with 10% fetal bovine serum (Gibco; Thermo Fisher Scientific, Inc.) and penicillin streptomycin solution (cat. no., SV30010; HyClone; GE Healthcare Life Sciences, Little Chalfont, UK) at 1X working concentration. The cells were cultured at 37°C in a 5% CO2 atmosphere. The cells were obtained from the Type Culture Collection of the Chinese Academy of Sciences (Shanghai, China).

Transient transfection and dual luciferase reporter assay

The PTC cells were seeded into 24-well plates (1×105 cells/well), and incubated for 12 h at 37°C in complete medium. The TPC1 and B-CPAP cells were transfected with 0.5 µg of PGL-3 reporter constructs with a number of LAPTM4B promoter inserts and pGL-3 promoter vector; all truncated plasmids were conserved by the laboratory [Key Laboratory of Carcinogenesis and Translational Research (Ministry of Education), Department of Clinical Laboratory, Peking University Cancer Hospital & Institute, Beijing, China] (24). Different regions of LAPTM4B promoter were inserted to PGL-3 reporter constructs: −1341/+191, −881/+191, −558/+191, −206/+174, −38/+191, +1−/+292 and +10/+311. A 0.02-µg phRL-CMV plasmid (E6271; Promega Corporation, Madison, WI, USA) was transfected in each well at the same time to normalize for the transfection efficiency. Transfection was performed using Lipofectamine 3000 transfection reagent (Invitrogen; Thermo Fisher Scientific, Inc.) according to the manufacturer's protocol. At 48 h following transfection, cell lysates were collected for luciferase activity detection using the DualGlo Luciferase Assay system (Promega Corporation), according to the manufacturer's protocol. All reactions were performed in triplicate and results were normalized to the Renilla luciferase activity. The luciferase value of all the plasmids was compared with that of the pGL-3 promoter (positive control), which was set as 100%.

Statistics analysis

All data were analyzed using SPSS v22.0 software (IBM Corp., Armonk, NY, USA). Genotypic frequencies were tested for Hardy-Weinberg equilibrium using the χ2 test. Fisher's exact test was used to calculate the genotypic frequency and other parametric distributions between cancer cases and controls. Associations between genotypes and the risk of thyroid papillary cancer were estimated using odds ratios (ORs) and 95% confidence intervals (CIs), which were computed by using unconditional logistic regression models. All ORs were adjusted for age and sex, as appropriate. A one-way analysis of variance was applied for the comparison of luciferase report assay data, followed by a least significant difference (LSD) multiple-range post-hoc test to detect significant differences between different groups. P<0.05 was considered to indicate a statistically significant difference.

Results

LAPTM4B genotypes

The three different genotypes were identified using PCR: LAPTM4B*1/1, homozygotes; LAPTM4B*2/2, homozygotes; and LAPTM4B*1/2 heterozygotes (Fig. 1). The LAPTM4B*1/1 genotype was identified by the presence of a 204-bp band, the LAPTM4B*2/2 genotype was identified by the presence of a 223-bp band. The presence of 204-bp and 223-bp bands together identified the heterozygotic LAPTM4B*1/2 genotype. The human β-actin PCR product was a 340-bp band that appeared in all internal controls. PCR products were sequenced and the results are presented in Fig. 2.

Figure 1.

Genotyping of LAPTM4B alleles in 5 patient samples. Lanes 1 and 4, LAPTM4B*1/1; lanes 2 and 5, LAPTM4B*1/2; lane 3, LAPTM4B*2/2. M, DNA marker; LAPTM4B, lysosome-associated protein transmembrane 4-β; Bp, base pairs.

Figure 2.

Sequence of polymerase chain reaction products form patient blood samples. LAPTM4B*1 contains one 19 bp sequence (gray box), located in the promoter region (white box), following the transcription start site (double black lines) and prior to the open reading frame region (black box). LAPTM4B*2 contains two 19 bp sequences located at the same position. Sequencing results are presented below the gene structure display. LAPTM4B, lysosome-associated protein transmembrane 4-β.

LAPTM4B genotypes and PTC susceptibility

The frequency of LAPTM4B genotypes of 183 patients (P=0.37) and 697 health controls (P=0.352) were in accordance with Hardy-Weinberg equilibrium distribution. There were statistically significant differences in age and sex between patients with PTC and healthy controls in the present study (Table I). Following OR adjustments by sex and age, the risk of PTC in patients with the LAPTM4B*2/2 genotype was identified to be 2.765-fold higher compared with that in samples with the LAPTM4B*1/1 genotype. The risk of PTC in patients with a copy of LAPTM4B*2 is 1.516-fold higher compared with that in patients with only LAPTM4B*1 (Table II).

Table I.

General characterization of case and control group.

Characteristics	Controls, n (%) n=697	Thyroid carcinoma, n (%) n=183	P-value[a]
Sex			P<0.001
Female	249 (35.7)	132 (72.1)
Male	448 (64.2)	51 (27.8)
Age, years			P<0.001
≤40	110 (15.8)	87 (47.5)
41–50	223 (32.0)	49 (26.8)
51–60	142 (20.4)	31 (16.9)
61–70	106 (15.2)	15 (8.2)
>70	116 (16.6)	1 (0.6)

Analyzed using a χ2 test.

Table II.

Genotype and allelic frequencies of LAPTM4B gene polymorphism in PTC patients and controls.

LAPTM4B status	Healthy controls[a], n (%) n=697	PTC, n (%) n=183	Odds ratio[b] (95% CI)	P-value
Allele
*1	1,058 (75.9)	253 (69.1)
*2	336 (24.1)	113 (30.9)	1.516 (1.140–2.017)	0.004
Genotype
*1/1	397 (57.0)	90 (49.2)
*1/2	264 (37.8)	73 (39.9)	1.352 (0.919–1.987)	0.125
*2/2	36 (5.2)	20 (10.9)	2.765 (1.384–5.524)	0.004

Data were analyzed by non-conditional logistic regression analysis.

Adjusted for age and sex. LAPTM4B, lysosome-associated protein transmembrane 4-β; PTC, papillary thyroid carcinoma; CI, confidence interval.

Genotypes of LAPTM4B and clinical parameters

By analyzing the clinical parameters of patients with PTC and healthy controls, the female sex was identified to be significantly associated with LAPTM4B 2/2 genotype, whereas age, central lymph node metastasis condition, invasive condition of the tumor, tumor size, BMI, tumor location and TMN stage were not significantly associated with a specific LAPTM4B genotype (Table III).

Table III.

Association between LAPTM4B genotypes and clinical characteristics of papillary thyroid carcinoma.

	LAPTM4B genotype
Characteristics	1/1	1/2	2/2	P-value
Age, years				0.705
>40	50	37	12
≤40	40	36	8
Sex				0.046
Female	64	49	19
Male	26	24	1
CLNM				0.219
Positive	56	53	11
Negative	34	20	9
Invasive tumor				0.531
Yes	49	39	8
No	41	34	12
Tumor size, cm				0.836
≥1	40	26	8
<1	46	42	11
Unknown	4	5	1
TNM stage				0.290
I–II	58	41	10
III–IV	19	16	8
Unknown	13	16	2
Tumor location				0.777
One side	17	8	4
Two sides	1	3	0
Isthmus	3	2	1
Two sides and isthmus	7	7	1
One side and isthmus	62	53	14
BMI				0.531
>25	49	39	8
≤25	41	34	12

LAPTM4B, lysosome-associated protein transmembrane 4-β; CLNM, central lymph node metastasis; TNM, tumor-node-metastasis.

LAPTM4B genotypes and PTC susceptibility compared between females and males

As sex was associated with a certain LAPTM4B genotype, the LAPTM4B genotypes of females and males were analyzed separately. In the female patients that were analyzed, a LAPTM4B*2/2 genotype increased the risk of developing PTC 5.494-fold compared with the LAPTM4B*1/1 genotype. A female carrying a copy of LAPTM4B*2 had a 1.968-fold increased risk of PTC compared with those carrying only copies of LAPTM4B*1 alone (Table IV). However, no statistically significant difference in LAPTM4B genotype frequency was exhibited between the PTC patients and the healthy controls in males (Table V).

Table IV.

Frequency of LAPTM4B in female PTC patients and healthy controls.

LAPTM4B status	Healthy controls, n (%) n=249	PTC, n (%) n=132	Odds ratio (95% CI)	P-value
Allele
*1	395 (79.3)	177 (67.0)
*2	103 (20.7)	87 (33.0)	1.968 (1.363–2.841)	<0.001[a]
Genotype
*1/1	156 (62.7)	64 (48.5)
*1/2	83 (33.3)	49 (37.1)	1.443 (0.880–2.365)	0.146[b]
*2/2	10 (4.0)	19 (14.4)	5.494 (2.198–13.730)	<0.001[b]

Compared with LAPTM4B*1.

Compared with LAPTM4B*1/1. LAPTM4B, lysosome-associated protein transmembrane 4-β; PTC, papillary thyroid carcinoma; CI, confidence interval.

Table V.

The frequency of LAPTM4B in male papillary thyroid carcinoma patients and male healthy controls.

LAPTM4B status	Healthy controls, n (%) n=448	PTC, n (%) n=51	OR (95% CI)	P-value
Allele
*1	663 (74.0)	76 (74.5)
*2	233 (26.0)	26 (25.5)	0.996 (0.615–1.612)	0.986[a]
Genotype
*1/1	241 (53.8)	26 (50.9)
*1/2	181 (40.4)	24 (47.1)	1.187 (0.649–2.169)	0.577[b]
*2/2	26 (5.8)	1 (2.0)	0.445 (0.057–3.481)	0.440[b]

Compared with LAPTM4B*1.

Compared with LAPTM4B*1/1. LAPTM4B, lysosome-associated protein transmembrane 4-β; PTC, papillary thyroid carcinoma; CI, confidence interval.

Association between LAPTvM4B genotype and clinical parameters in female patients

The clinical parameters and genotypes of LAPTM4B were further analyzed in the female participants. There was no significant association between age, central lymph node metastasis, invasive condition of the tumor, tumor size, TNM stage, tumor location, BMI, number of pregnancies or menopause condition and LAPTM4B genotype (Table VI).

Table VI.

Association between LAPTM4B genotypes and clinical characteristics of papillary thyroid carcinoma in the female group.

	LAPTM4B genotype
Characteristics	*1/1 (n=64)	*1/2 (n=49)	*2/2 (n=19)	P-value
Age, years				0.745
>40	34	27	12
≤40	30	22	7
CLNMa				0.084
Positive	21	10	9
Negative	43	39	10
Invasive tumor				0.640
Yes	28	24	7
No	36	25	12
Tumor size, cm				0.816
≥1	28	16	7
<1	33	31	11
Unknown	3	2	1
TNM stage				0.228
I–II	41	27	9
III–IV	16	11	8
Unknown	7	11	2
Tumor location				0.856
One side	10	6	4
Two sides	0	2	0
Isthmus	2	2	1
Two sides and isthmus	4	3	1
One side and isthmus	48	36	13
BMI				0.64
>25	28	24	7
≤25	36	25	12
Pregnancies				0.852
0	12	10	4
1	37	32	14
≥2	10	6	1
Unknown	5	1	0
Menopause				0.138
Yes	16	12	9
No	48	37	10

CLNM, central lymph node metastasis; TNM, tumor-node-metastasis; BMI, body mass index.

Dual luciferase reporter assay

The difference between LAPTM4B*1 and LAPTM4B*2 is the presence of a 19-bp sequence located in the 5′UTR of exon 1. Thus, the current study hypothesized that the extra 19-bp sequence may affect the transcriptional activity of LAPTM4B*2, resulting in an altered biological function that causes the patients that carry LAPTM4B*2 to be susceptible to PTC. In total seven types of luciferase reporter plasmid were transfected into TPC1 and B-CPAP cells (Fig. 3). The +10/+292 plasmid, which contains one 19-bp sequence, had the highest transcription activity, and the +10/+311 plasmid, including an extra 19-bp sequence, had the second highest (Fig. 4). It is possible that there may be transcription factors that bind to the extra 19-bp sequence, increasing transcriptional activity; however, the susceptibility of individuals with the LAPTM4B*2 to PTC is not caused by transcriptional regulation of the polymorphism region in these two cell lines.

Figure 3.

Plasmid details of those used in the dual luciferase reporter assay. The black box represents the luciferase gene; the gray box represents the 19 bp sequence; the arrow represents the transcription start site.

Figure 4.

Relative luciferase activity in papillary thyroid carcinoma cells. These values are from three independence experiments performed in triplicate in the (A) TPC1 and (B) B-CPAP cell lines (*P<0.05; n=3).

Discussion

PTC is the most frequently occurring well-differentiated form of thyroid carcinoma (25). In recent years, PTC has become the most common type of cancer in female patients (26). Gene mutation, rearrangement and certain genetic polymorphisms are hypothesized to be the etiological factors associated with the development of PTC (27–29). In addition, female hormones may also promote susceptibility to PTC in females (30). However, the etiology of PTC remains to be elucidated. The present study has demonstrated that LAPTM4B gene polymorphism is a susceptibility factor to papillary thyroid carcinoma in Chinese females. A female patient carrying a copy of LAPTM4B*2 is more susceptible to PTC compared with those carrying only LAPTM4B*1.

In the present study, a dual luciferase reporter assay was performed, demonstrating that the transcriptional activity of LAPTM4B*1 was higher compared with that of LAPTM4B*2 in PTC cells. Previous clinical studies have revealed that the overexpression of LAPTM4B gene facilitates tumorigenesis by promoting cell proliferation (31–33), inhibiting apoptosis (34) and initiating autophagy (35) in numerous types of carcinoma. Therefore, the current study hypothesized that LAPTM4B*2 may have an increased transcriptional activity compared with that LAPTM4B*1, which may explain why people with LAPTM4B allele *2 demonstrate increased susceptibility to PTC. However, the transcription activity of LAPTM4B*2 was reduced compared with that of LAPTM4B*1 in PTC cells. Therefore, the underlying mechanism as to why patients with LAPTM4B*2 are more susceptible to PTC is not associated with the transcriptional regulation of the polymorphism region in TPC1 and B-CPAP cell lines.

Screening the sequence of the LAPTM4B*2 and LAPTM4B*1, the extra 19 bp sequence may directly induce the skipping of the termination codon, which would promote the protein-code frame lengthened of 53 amino acids at the N terminus and produce a variation of the functional protein compared with that of LAPTM4B*1 (Fig. 5). The N terminus of the LAPTM4B protein serves a key role in cell signal transduction, ligand-receptor binding (12) and certain other fields such as cell invasion, migration and cell proliferation (36). Therefore, the protein encoded by LAPTM4B*2 may promote the progression of tumor development.

Figure 5.

Comparison of the putative proteins encoded by LAPMTB4*1 and LAPTM4B*2. Partial sequences of exon 1 are demonstrated. The nucleotide sequences are numbered with the putative transcription start site designated as +1. In-frame stop codons are underlined and marked with a hash symbol. The 19 bp sequences in both alleles are underlined. Owning to in-frame stop codons at nucleotide 40 and 103, mRNA of LAPTM4B*1 that only begin translation at nucleotide 157. However, LAPTM4B*2 may initiate translation at nucleotide 17, which would produce an extra 53 amino acids, indicated by letters underscored with the dotted line at N-terminus of LAPTM4B. LAPTM4B, lysosome-associated protein transmembrane 4-β.

The present study compared the LAPTM4B genotypes between PTC patients and a healthy control group. The LAPTM4B*2/*2 genotype distribution frequency and LAPTM4B*2 distribution frequency between the two groups were significantly different. However, the analysis of clinical parameters revealed that the LAPTM4B genotype frequency was associated with the female sex, so LAPTM4B genotype frequency was analyzed separately for males and females. A significant difference in LAPTM4B genotype frequency was observed between female patients with PTC and female healthy controls. This result verified that females have increased susceptibility to PTC; however, the negative results observed in the male group requires verification in a larger sample.

Previous studies have revealed that individuals with the LAPTM4B*1/*2 genotype are also susceptible to numerous types of tumor (11,12,19). Nevertheless, the present study into PTC indicates that only those with the LAPTM4B*2/*2 genotype are more susceptible to PTC. Unlike less-differentiated tumors, which are more aggressive and impart a poorer prognosis, well-differentiated PTC may require homozygotic LAPTM4B*2/2 to drive tumorigenesis.

In conclusion, the present study demonstrated that the presence of the LAPTM4B*2 allele is associated with increased susceptibility of Chinese females to PTC, and that this susceptibility is not caused by transcriptional regulation mediated by the 19 bp addition in LAPTM4B*2.