Literature DB >> 28926006

Developing a framework to assess the costeffectiveness of COMPARE - a global platform for the exchange of sequence-based pathogen data.

F Alleweldt, S Kara, A Osinski, P Van Baal, K Kellerborg, F M Aarestrup, M Koopmans.   

Abstract

Analysing the genomic data of pathogens with the help of next-generation sequencing (NGS) is an increasingly important part of disease outbreak investigations and helps guide responses. While this technology has already been successfully employed to elucidate and control disease outbreaks, wider implementation of NGS also depends on its cost-effectiveness. COMPARE - short for 'Collaborative Management Platform for detection and Analyses of (Re-) emerging and foodborne outbreaks' - is a major project, funded by the European Union, to develop a global platform for sharing and analysing NGS data and thereby improve the rapid identification, containment and mitigation of emerging infectious diseases and foodborne outbreaks. This article introduces the project and presents the results of a review of the literature, composed of previous relevant cost-benefit and cost-effectiveness analyses. The authors also outline the implications for a methodological framework to assess the costeffectiveness of COMPARE and similar systems.

Entities:  

Keywords:  COMPARE; Cost-benefit; Cost-effectiveness; Detection; Genomic information; Next-generation sequencing; Pathogen; Surveillance

Mesh:

Year:  2017        PMID: 28926006     DOI: 10.20506/rst.36.1.2631

Source DB:  PubMed          Journal:  Rev Sci Tech        ISSN: 0253-1933            Impact factor:   1.181


  3 in total

1.  Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR.

Authors:  Victor M Corman; Olfert Landt; Marco Kaiser; Richard Molenkamp; Adam Meijer; Daniel Kw Chu; Tobias Bleicker; Sebastian Brünink; Julia Schneider; Marie Luisa Schmidt; Daphne Gjc Mulders; Bart L Haagmans; Bas van der Veer; Sharon van den Brink; Lisa Wijsman; Gabriel Goderski; Jean-Louis Romette; Joanna Ellis; Maria Zambon; Malik Peiris; Herman Goossens; Chantal Reusken; Marion Pg Koopmans; Christian Drosten
Journal:  Euro Surveill       Date:  2020-01

2.  Economic evaluation of whole genome sequencing for pathogen identification and surveillance - results of case studies in Europe and the Americas 2016 to 2019.

Authors:  Frank Alleweldt; Şenda Kara; Kris Best; Frank M Aarestrup; Martin Beer; Theo M Bestebroer; Josefina Campos; Gabriele Casadei; Isabel Chinen; Gary Van Domselaar; Catherine Dominguez; Helen E Everett; Ron Am Fouchier; Kathie Grant; Jonathan Green; Dirk Höper; Jonathan Johnston; Marion Pg Koopmans; Bas B Oude Munnink; Robert Myers; Celine Nadon; Ami Patel; Anne Pohlmann; Stefano Pongolini; Aleisha Reimer; Shane Thiessen; Claudia Wylezich
Journal:  Euro Surveill       Date:  2021-03

Review 3.  Developmental roadmap for antimicrobial susceptibility testing systems.

Authors:  Alex van Belkum; Till T Bachmann; Gerd Lüdke; Jan Gorm Lisby; Gunnar Kahlmeter; Allan Mohess; Karsten Becker; John P Hays; Neil Woodford; Konstantinos Mitsakakis; Jacob Moran-Gilad; Jordi Vila; Harald Peter; John H Rex; Wm Michael Dunne
Journal:  Nat Rev Microbiol       Date:  2019-01       Impact factor: 60.633

  3 in total

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