| Literature DB >> 28923077 |
Yifei Lu1, Hongxiang Yan1, Jiezhong Deng1, Zhigang Huang1, Xurui Jin1, Yanlan Yu1, Qiwen Hu1, Fuquan Hu1, Jing Wang2.
Abstract
BACKGROUND: Lactococcus lactis is a food grade probiotics and widely used to express heterologous proteins. Generally, target genes are knocked into the L. lactis genome through double-crossover recombination to express heterologous proteins stably. However, creating marker-less heterologous genes knocked-in clones is laborious. In this study, an efficient heterologous gene knock-in reporter system was developed in L. lactis NZ9000.Entities:
Keywords: Knock-in reporter system; Knocked-in heterologous gene; Lactococcus lactis; NZ9000; lacZ
Mesh:
Year: 2017 PMID: 28923077 PMCID: PMC5604289 DOI: 10.1186/s12934-017-0770-1
Source DB: PubMed Journal: Microb Cell Fact ISSN: 1475-2859 Impact factor: 5.328
Fig. 1Map of the Ts plasmid pJW. His, fragment from L. lactis as homologous arms; Ts Ori, temperature-sensitive replicon from pCrePA2; Ori, replicon from pUC18; Em , erythromycin resistance gene; Ap , ampicillin resistance gene
Fig. 2Confirmation analysis of the NZB strain. a Schematic of genomes of NZ9000 and NZB. LO, RO, LF, LR, primers used in multiple-PCR analysis. b Multiple-PCR analysis of the NZB and NZ9000 strain. The primer combinations used in PCR are presented on the lanes. Genomic DNA from the following strains were used as templates: NZB (lanes 1 and 3) and NZ9000 (lanes 2 and 4). The 1 kb DNA ladder marker is shown on the left (M). The theoretical size (bp) of each PCR products generated with the primer combinations is shown in Additional file 1: Table S1. c NZ9000 (left) and NZB (right) colonies on M17GS-XN
Fig. 3Schematic of the knock-in reporter system. a A pJW-HDF vector (derivative of pJW) was introduced into NZB at 30 °C. b The single-crossover recombination colonies were selected at 38.5 °C with erythromycin. The single-crossover recombination event occurred in either Hisa region or Hisb region (not shown in schematic). c At 25 °C without antibiotic, the plasmid region in the genome was excised through a second recombination. At the statuses i and ii, the colonies were blue on M17GS-XN plate. At status iii, the colonies were white on M17GS-XN plate. d Representative white colonies (HGK clones) from the blue colonies (plasmid-integrated clones and NZB clones). HDF, heterologous DNA fragment
Fig. 4Confirmation analysis of the five HDFs knocked-in strains constructed through the knock-in reporter system. a Schematic of genomes of the NZ9000, NZB, and the five HDF knocked-in strains. LO, RO, LF, LR, P32Rec, PZRec, and TerRec as primers used in Multiple-PCR analysis. b Confirmation analysis of the HDFs knocked-in strains by multiple-PCR analysis. The primer combinations used in PCR are presented on the lanes. Genomic DNA from the following strains were used as templates: 1.3k-NZ (lanes 1, 8, and 15), 2.2k-NZ (lanes 2, 9, and 16), 3.8k-NZ (lanes 3, 10, and 17), 7.3k-NZ (lanes 4, 11, and 18), 14.6k-NZ (lanes 5, 12, and 19), NZB (lanes 6, 13, and 20) and NZ9000 (lanes 7, 14, and 21). The 1 kb DNA ladder marker is shown on the left (M1), and the λ/HindIII marker is shown on the right (M2). The theoretical size (bp) of each PCR products generated with the primer combinations is shown in Additional file 1: Table S1. HDF, heterologous DNA fragment; LO, RO, LF, LR, P32Rec, PZRec, and TerRec as the primers used in Multiple-PCR analysis
White colony occurrence and accuracy rate in the evaluation of the knock-in reporter system
| Name | HDF length (bp) | Total colonies | White colonies | White colony occurrence rate (‰) | Accuracy rate (%) |
|---|---|---|---|---|---|
| 1.3k-NZ | 1317 | 6765 | 58 | 8.873 | 100.00 |
| 2.2k-NZ | 2163 | 7508 | 44 | 5.860 | 100.00 |
| 3.8k-NZ | 3856 | 15,239 | 21 | 1.378 | 100.00 |
| 7.3k-NZ | 7277 | 14,599 | 12 | 0.8220 | 100.00 |
| 14.6k-NZ | 14,620 | 16,349 | 3 | 0.1835 | 100.00 |
Bacterial strains and plasmids used in this study
| Strain | Characteristics | Source |
|---|---|---|
|
| Cloning host for maintaining recombinant plasmids | Lab collection |
|
| Derivative of MG1363; | [ |
|
| Derivative of NZ9000; | This study |
| Plasmids | ||
| pUC18 | Cloning vector; | Lab collection |
| pUC-H | Derivative of pUC18; containing His fragment from | This study |
| pCrePA2 | An improved version of the pCrePA [ | Kindly gifted by Stephen H. Leppla |
| pJW |
| This study |
| pMG36e | Wide-host-range vector; | [ |
| pQE31- | Derivative of the expression vector pQE31; containing | [ |
| pMG-PZL | derivative of pMG36e; containing | This study |
| pJW-PZLT |
| This study |
Ap ampicillin resistant, Em erythromycin resistant, Ts temperature-sensitive
Primers used in this study
| Primers | Sequence (5′–3′) | Restriction sites |
|---|---|---|
| HisF | AAA |
|
| HisR | GTTTGGGAGTCGCCTTTGGCTC | – |
| TsF | AAA |
|
| TsR | AAA |
|
| PZF | AAA |
|
| PZR | TGATAATTGTGTCATTTTGAGTGCCTCCTTATAAT | – |
| LF | AAGGAGGCACTCAAAATGACACAATTATCACGTTT | – |
| LR | AAA |
|
| P32Rec | AAGTCGCGT |
|
| PZRec | AAGTCGCGT |
|
| TerRec | GAAATGATA |
|
| LO | GCTCCATGAATTTCCTAATTGATGC | – |
| RO | GATGAAGCTTATATTGACTTTGGCG | – |
Restriction enzyme cut sites are in bold