| Literature DB >> 28919414 |
Xiaoyun Li1, Bojia Peng1, Xiaofeng Zhu2, Panpan Wang1, Yingquan Xiong1, Hengrui Liu1, Kehuan Sun3, Haixia Wang3, Ling Ou1, Zhidi Wu1, Xiaoguang Liu3, Haibin He1, Shu Mo3, Xunqian Peng3, Ya Tian1, Ronghua Zhang4, Li Yang5.
Abstract
Recently, several studies have indicated that circular RNAs (circRNAs) play significant roles in various disease; however, little is known about the chronology of estrogen receptor beta (ERβ) deficiency and altered circRNA expression, or their relationship with osteogenesis. Herein, we show through western-blot and quantitative real-time PCR assays, that when ERβ is silenced, the expression of osteogenesis-related proteins and mRNAs were down-regulated. We then performed RNA-Seq to analyze differential circRNA expression between the control and ERβ knockdown group. This analysis revealed that, 146 circRNAs were differentially expressed by fold-change≥2.0, p ≤ 0.05, and, among this group, 68 circRNAs were down-regulated, while 78 were up-regulated. Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) and PANTHER pathway analyses were performed to predict the function of these differentially expressed circRNAs. Finally, co-expressed targets gene, and circRNA-microRNA network were constructed for predicted miRNA sponges. This research suggested that ERβ may through 2:27713879|27755789/2:240822115|240867796-miR-328-5p-mRNA axis to regulate osteogenic differentiation.Entities:
Keywords: CircRNA; Estrogen receptor beta; Osteogenesis; RNA-Seq
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Year: 2017 PMID: 28919414 DOI: 10.1016/j.bbrc.2017.09.068
Source DB: PubMed Journal: Biochem Biophys Res Commun ISSN: 0006-291X Impact factor: 3.575