Literature DB >> 28912880

Spectroscopic analysis and docking simulation on the recognition and binding of TEM-1 β-lactamase with β-lactam antibiotics.

Jianting Yang1,2, Qian Li1, Liujiao Bian1.   

Abstract

The interaction between TEM-1 β-lactamase and antibiotics is very important in the hydrolysis of antibiotics. In the present study, the recognition and binding of TEM-1 β-lactamase with three β-lactam antibiotics, including penicillin G, cefalexin and cefoxitin, was investigated by fluorescence and ultraviolet-visible absorption spectra in combination with molecular docking in the temperature range of 278-288 K and under simulated physiological conditions. The results demonstrated that the fluorescence emissions of TEM-1 β-lactamase were extinguished by static quenching and the energy of TEM-1 β-lactamase was transferred in a non-radioactive manner. The binding of TEM-1 β-lactamase with the three antibiotics was a spontaneously exothermic process, with binding constants of 1.41×107, 7.81×106 and 5.43×104 at 278 K. Furthermore, binding was driven by enthalpy change and the binding forces between them were mainly hydrogen bonding and Van der Waals forces. A TEM-1 β-lactamase only bound with one antibiotic at a time and the binding capacity between them was closely associated with the functional groups and flexibility in the antibiotics. In addition, a conformational change occurred in the TEM-1 β-lactamases when they bound with the three antibiotics and TEM-1 β-lactamase-antibiotic complexes were formed. The present study provided an insight into the recognition and binding of TEM-1 β-lactamase with β-lactam antibiotics, which may be helpful for designing a novel substrate for TEM-1 β-lactamase and developing novel antibiotics that are resistant to the enzyme.

Entities:  

Keywords:  TEM-1 β-lactamase; binding; fluorescence spectroscopy; molecular docking; β-lactam antibiotics

Year:  2017        PMID: 28912880      PMCID: PMC5585764          DOI: 10.3892/etm.2017.4853

Source DB:  PubMed          Journal:  Exp Ther Med        ISSN: 1792-0981            Impact factor:   2.447


  39 in total

1.  TEM-1 beta-lactamase as a scaffold for protein recognition and assay.

Authors:  Daniel Legendre; Bénédicte Vucic; Vincent Hougardy; Anne-Lise Girboux; Christophe Henrioul; Julien Van Haute; Patrice Soumillion; Jacques Fastrez
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

2.  The evolution of cefotaximase activity in the TEM β-lactamase.

Authors:  Manoj Kumar Singh; Brian N Dominy
Journal:  J Mol Biol       Date:  2011-11-03       Impact factor: 5.469

3.  Novel peptide inhibiting both TEM-1 β-lactamase and penicillin-binding proteins.

Authors:  Denis Phichith; Sylvie Bun; Severine Padiolleau-Lefevre; Adeline Guellier; Soun Banh; Moreno Galleni; Jean-Marie Frere; Daniel Thomas; Alain Friboulet; Berangere Avalle
Journal:  FEBS J       Date:  2010-11-02       Impact factor: 5.542

4.  FTIR and synchronous fluorescence heterospectral two-dimensional correlation analyses on the binding characteristics of copper onto dissolved organic matter.

Authors:  Wei Chen; Nuzahat Habibul; Xiao-Yang Liu; Guo-Ping Sheng; Han-Qing Yu
Journal:  Environ Sci Technol       Date:  2015-02-05       Impact factor: 9.028

Review 5.  Emerging issues in gram-negative bacterial resistance: an update for the practicing clinician.

Authors:  Shawn Vasoo; Jason N Barreto; Pritish K Tosh
Journal:  Mayo Clin Proc       Date:  2015-03       Impact factor: 7.616

6.  The amino-acid substituents of dipeptide substrates of cathepsin C can determine the rate-limiting steps of catalysis.

Authors:  Jon K Rubach; Guanglei Cui; Jessica L Schneck; Amy N Taylor; Baoguang Zhao; Angela Smallwood; Neysa Nevins; David Wisnoski; Sara H Thrall; Thomas D Meek
Journal:  Biochemistry       Date:  2012-09-13       Impact factor: 3.162

7.  Exploring the role of a conserved class A residue in the Ω-Loop of KPC-2 β-lactamase: a mechanism for ceftazidime hydrolysis.

Authors:  Peter S Levitt; Krisztina M Papp-Wallace; Magdalena A Taracila; Andrea M Hujer; Marisa L Winkler; Kerri M Smith; Yan Xu; Michael E Harris; Robert A Bonomo
Journal:  J Biol Chem       Date:  2012-07-26       Impact factor: 5.157

8.  Engineering allosteric regulation into the hinge region of a circularly permuted TEM-1 beta-lactamase.

Authors:  Valéry Mathieu; Jacques Fastrez; Patrice Soumillion
Journal:  Protein Eng Des Sel       Date:  2010-06-30       Impact factor: 1.650

9.  False extended-spectrum {beta}-lactamase phenotype in clinical isolates of Escherichia coli associated with increased expression of OXA-1 or TEM-1 penicillinases and loss of porins.

Authors:  Alejandro Beceiro; Sunil Maharjan; Tom Gaulton; Michel Doumith; Nelson C Soares; Hiran Dhanji; Marina Warner; Maeve Doyle; Mary Hickey; Gordon Downie; Germán Bou; David M Livermore; Neil Woodford
Journal:  J Antimicrob Chemother       Date:  2011-07-08       Impact factor: 5.790

10.  Thermodynamics of protein association reactions: forces contributing to stability.

Authors:  P D Ross; S Subramanian
Journal:  Biochemistry       Date:  1981-05-26       Impact factor: 3.162

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  1 in total

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Authors:  Aben Ovung; A Mavani; Ambarnil Ghosh; Sabyasachi Chatterjee; Abhi Das; Gopinatha Suresh Kumar; Debes Ray; Vinod K Aswal; Jhimli Bhattacharyya
Journal:  ACS Omega       Date:  2022-02-04
  1 in total

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