Literature DB >> 28911768

Natural Isotope Abundance in Metabolites: Techniques and Kinetic Isotope Effect Measurement in Plant, Animal, and Human Tissues.

Illa Tea1, Guillaume Tcherkez2.   

Abstract

The natural isotope abundance in bulk organic matter or tissues is not a sufficient base to investigate physiological properties, biosynthetic mechanisms, and nutrition sources of biological systems. In fact, isotope effects in metabolism lead to a heterogeneous distribution of 2H, 18O, 13C, and 15N isotopes in metabolites. Therefore, compound-specific isotopic analysis (CSIA) is crucial to biological and medical applications of stable isotopes. Here, we review methods to implement CSIA for 15N and 13C from plant, animal, and human samples and discuss technical solutions that have been used for the conversion to CO2 and N2 for IRMS analysis, derivatization and isotope effect measurements. It appears that despite the flexibility of instruments used for CSIA, there is no universal method simply because the chemical nature of metabolites of interest varies considerably. Also, CSIA methods are often limited by isotope effects in sample preparation or the addition of atoms from the derivatizing reagents, and this implies that corrections must be made to calculate a proper δ-value. Therefore, CSIA has an enormous potential for biomedical applications, but its utilization requires precautions for its successful application.
© 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Compound specific; Derivatization; Isotope abundance; Isotope effect; Isotope ratio mass spectrometry

Mesh:

Substances:

Year:  2017        PMID: 28911768     DOI: 10.1016/bs.mie.2017.07.020

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  6 in total

1.  13C Natural Isotope Abundance in Urothelium as a New Marker in the Follow-Up of Patients with Bladder Cancer.

Authors:  Adam Madej; Ewa Forma; Michał Golberg; Rafał Kamiński; Piotr Paneth; Józef Kobos; Waldemar Różański; Marek Lipiński
Journal:  Cancers (Basel)       Date:  2022-05-13       Impact factor: 6.575

2.  Compound-Specific 14N/15N Analysis of Amino Acid Trimethylsilylated Derivatives from Plant Seed Proteins.

Authors:  Jean-Baptiste Domergue; Julie Lalande; Cyril Abadie; Guillaume Tcherkez
Journal:  Int J Mol Sci       Date:  2022-04-28       Impact factor: 6.208

3.  Position-specific 13 C/12 C analysis of amino acid carboxyl groups - automated flow-injection analysis based on reaction with ninhydrin.

Authors:  Brian Fry; James F Carter; Keita Yamada; Naohiro Yoshida; Dieter Juchelka
Journal:  Rapid Commun Mass Spectrom       Date:  2018-06-30       Impact factor: 2.419

4.  N uptake, assimilation and isotopic fractioning control δ 15N dynamics in plant DNA: A heavy labelling experiment on Brassica napus L.

Authors:  Alessandro Foscari; Giulia Leonarduzzi; Guido Incerti
Journal:  PLoS One       Date:  2021-03-11       Impact factor: 3.240

Review 5.  Stable Isotope Abundance and Fractionation in Human Diseases.

Authors:  Illa Tea; Arnaud De Luca; Anne-Marie Schiphorst; Mathilde Grand; Sophie Barillé-Nion; Eric Mirallié; Delphine Drui; Michel Krempf; Régis Hankard; Guillaume Tcherkez
Journal:  Metabolites       Date:  2021-06-09

Review 6.  Metabolic Flux Analysis-Linking Isotope Labeling and Metabolic Fluxes.

Authors:  Yujue Wang; Fredric E Wondisford; Chi Song; Teng Zhang; Xiaoyang Su
Journal:  Metabolites       Date:  2020-11-06
  6 in total

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