Literature DB >> 28904194

Distinct Mechanism for the Formation of the Ribonucleoprotein Complex of Tomato Spotted Wilt Virus.

Yu Guo1,2, Baocheng Liu1, Zhenzhen Ding1, Guobang Li1,2, Meizi Liu1, Dantong Zhu3, Yuna Sun4, Shishang Dong5,6, Zhiyong Lou7,8,2.   

Abstract

The Tomato spotted wilt virus (TSWV) belongs to the Tospovirus genus of the Bunyaviridae family and represents the sole plant-infecting group within bunyavirus. TSWV encodes a nucleocapsid protein (N) which encapsidates the RNA genome to form a ribonucleoprotein complex (RNP). In addition, the N has multiple roles during the infection of plant cells. Here, we report the crystal structure of the full-length TSWV N. The N features a body domain consisting of an N-lobe and a C-lobe. These lobes clamp a positively charged groove which may constitute the RNA binding site. Furthermore, the body domains are flanked by N- and C-terminal arms which mediate homotypic interactions to the neighboring subunits, resulting in a ring-shaped N trimer. Interestingly, the C terminus of one protomer forms an additional interaction with the protomer of an adjacent trimer in the crystal, which may constitute a higher-order oligomerization contact. In this way, this study provides insights into the structure and trimeric assembly of TSWV N, which help to explain previous functional findings, but also suggests distinct N interactions within a higher-order RNP.IMPORTANCE TSWV is one of the most devastating plant pathogens that cause severe diseases in numerous agronomic and ornamental crops worldwide. TSWV is also the prototypic member of the Tospovirus genus, which is the sole group of plant-infecting viruses in the bunyavirus family. This study determined the structure of full-length TSWV N in an oligomeric state. The structural observations explain previously identified biological properties of TSWV N. Most importantly, the additional homotypic interaction between the C terminus of one protomer with another protomer indicates that there is a distinct mechanism of RNP formation in the bunyavirus family, thereby enhancing the current knowledge of negative-sense single-stranded RNA virus-encoded N. TSWV N is the last remaining representative N with an unknown structure in the bunyavirus family. Combined with previous studies, the structure of TSWV N helps to build a complete picture of the bunyavirus-encoded N family and reveals a close evolutionary relationship between orthobunyavirus, phlebovirus, hantavirus, and tospovirus.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  RNP formation; crystal structure; nucleocapsid protein; oligomerization; tomato spotted wilt virus

Mesh:

Substances:

Year:  2017        PMID: 28904194      PMCID: PMC5686726          DOI: 10.1128/JVI.00892-17

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  36 in total

Review 1.  Global status of tospovirus epidemics in diverse cropping systems: successes achieved and challenges ahead.

Authors:  H R Pappu; R A C Jones; R K Jain
Journal:  Virus Res       Date:  2009-02-02       Impact factor: 3.303

2.  Molecular basis for the formation of ribonucleoprotein complex of Crimean-Congo hemorrhagic fever virus.

Authors:  Xiaojing Wang; Baobin Li; Yu Guo; Shu Shen; Liang Zhao; Peisheng Zhang; Yuna Sun; Sen-Fang Sui; Fei Deng; Zhiyong Lou
Journal:  J Struct Biol       Date:  2016-09-22       Impact factor: 2.867

Review 3.  Negative-strand RNA viruses: the plant-infecting counterparts.

Authors:  Richard Kormelink; Maria Laura Garcia; Michael Goodin; Takahide Sasaya; Anne-Lise Haenni
Journal:  Virus Res       Date:  2011-09-22       Impact factor: 3.303

4.  The nucleoprotein of severe fever with thrombocytopenia syndrome virus processes a stable hexameric ring to facilitate RNA encapsidation.

Authors:  Honggang Zhou; Yuna Sun; Ying Wang; Min Liu; Chao Liu; Wenming Wang; Xiang Liu; Le Li; Fei Deng; Hualin Wang; Yu Guo; Zhiyong Lou
Journal:  Protein Cell       Date:  2013-05-23       Impact factor: 14.870

5.  Expression and subcellular location of the NSM protein of tomato spotted wilt virus (TSWV), a putative viral movement protein.

Authors:  R Kormelink; M Storms; J Van Lent; D Peters; R Goldbach
Journal:  Virology       Date:  1994-04       Impact factor: 3.616

6.  The nonstructural NSm protein of tomato spotted wilt virus induces tubular structures in plant and insect cells.

Authors:  M M Storms; R Kormelink; D Peters; J W Van Lent; R W Goldbach
Journal:  Virology       Date:  1995-12-20       Impact factor: 3.616

7.  Crystal Structure of the Core Region of Hantavirus Nucleocapsid Protein Reveals the Mechanism for Ribonucleoprotein Complex Formation.

Authors:  Yu Guo; Wenming Wang; Yuna Sun; Chao Ma; Xu Wang; Xin Wang; Pi Liu; Shu Shen; Baobin Li; Jianping Lin; Fei Deng; Hualin Wang; Zhiyong Lou
Journal:  J Virol       Date:  2015-11-11       Impact factor: 5.103

8.  Structure and function analysis of nucleocapsid protein of tomato spotted wilt virus interacting with RNA using homology modeling.

Authors:  Jia Li; Zhike Feng; Jianyan Wu; Ying Huang; Gang Lu; Min Zhu; Bi Wang; Xiang Mao; Xiaorong Tao
Journal:  J Biol Chem       Date:  2014-12-24       Impact factor: 5.157

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Nucleocapsid protein structures from orthobunyaviruses reveal insight into ribonucleoprotein architecture and RNA polymerization.

Authors:  Antonio Ariza; Sian J Tanner; Cheryl T Walter; Kyle C Dent; Dale A Shepherd; Weining Wu; Susan V Matthews; Julian A Hiscox; Todd J Green; Ming Luo; Richard M Elliott; Anthony R Fooks; Alison E Ashcroft; Nicola J Stonehouse; Neil A Ranson; John N Barr; Thomas A Edwards
Journal:  Nucleic Acids Res       Date:  2013-04-17       Impact factor: 16.971

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  9 in total

1.  Rescue of tomato spotted wilt virus entirely from complementary DNA clones.

Authors:  Mingfeng Feng; Ruixiang Cheng; Minglong Chen; Rong Guo; Luyao Li; Zhike Feng; Jianyan Wu; Li Xie; Jian Hong; Zhongkai Zhang; Richard Kormelink; Xiaorong Tao
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-26       Impact factor: 11.205

Review 2.  The nucleocapsid protein of hantaviruses: much more than a genome-wrapping protein.

Authors:  Monika Reuter; Detlev H Krüger
Journal:  Virus Genes       Date:  2017-11-20       Impact factor: 2.332

3.  Advancing the Rose Rosette Virus Minireplicon and Encapsidation System by Incorporating GFP, Mutations, and the CMV 2b Silencing Suppressor.

Authors:  Cesar D Urrutia; Gustavo Romay; Brian D Shaw; Jeanmarie Verchot
Journal:  Viruses       Date:  2022-04-17       Impact factor: 5.818

4.  Identification and localization of Tospovirus genus-wide conserved residues in 3D models of the nucleocapsid and the silencing suppressor proteins.

Authors:  Cristian Olaya; Badri Adhikari; Gaurav Raikhy; Jianlin Cheng; Hanu R Pappu
Journal:  Virol J       Date:  2019-01-11       Impact factor: 4.099

Review 5.  The RNA-Dependent RNA Polymerase NIb of Potyviruses Plays Multifunctional, Contrasting Roles during Viral Infection.

Authors:  Wentao Shen; Yan Shi; Zhaoji Dai; Aiming Wang
Journal:  Viruses       Date:  2020-01-08       Impact factor: 5.048

Review 6.  Natural Resources Resistance to Tomato Spotted Wilt Virus (TSWV) in Tomato (Solanum lycopersicum).

Authors:  Shiming Qi; Shijie Zhang; Md Monirul Islam; Ahmed H El-Sappah; Fei Zhang; Yan Liang
Journal:  Int J Mol Sci       Date:  2021-10-12       Impact factor: 5.923

7.  Genome-Wide Identification and Functions against Tomato Spotted Wilt Tospovirus of PR-10 in Solanum lycopersicum.

Authors:  Md Monirul Islam; Shiming Qi; Shijie Zhang; Bakht Amin; Vivek Yadav; Ahmed H El-Sappah; Fei Zhang; Yan Liang
Journal:  Int J Mol Sci       Date:  2022-01-28       Impact factor: 5.923

Review 8.  The Bunyavirales: The Plant-Infecting Counterparts.

Authors:  Richard Kormelink; Jeanmarie Verchot; Xiaorong Tao; Cecile Desbiez
Journal:  Viruses       Date:  2021-05-06       Impact factor: 5.048

9.  Family Level Phylogenies Reveal Relationships of Plant Viruses within the Order Bunyavirales.

Authors:  Venura Herath; Gustavo Romay; Cesar D Urrutia; Jeanmarie Verchot
Journal:  Viruses       Date:  2020-09-10       Impact factor: 5.048

  9 in total

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