Literature DB >> 28898638

The Cell-Cycle State of Stem Cells Determines Cell Fate Propensity.

Siim Pauklin, Ludovic Vallier.   

Abstract

Entities:  

Year:  2014        PMID: 28898638      PMCID: PMC5652229          DOI: 10.1016/j.cell.2014.02.044

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


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(Cell 155, 135–147; September 26, 2013) Our paper demonstrated that the cell-cycle phase of pluripotent cells influences their propensity to differentiate to distinct fates. We compared human embryonic stem cells (hESCs) stably overexpressing cyclin D1 to a control hESC overexpressing GFP and compared hESCs exposed to a CDK inhibitor to hESCs. We show that cyclin D1 overexpression and CDK treatment induced differentiation. Although these experiments were done at the same time, we displayed the results of the cyclin-D1-overexpressing experiments in Figure 4 and the results of the CDK inhibition experiments in Figure 7. It has come to our attention that we mistakenly selected the same image of control cells for both Figures 4A and Figure 7A even though in one case (Figure 4A) they are labeled as GFP-overexpressing cells (GFP OE) and in the other (Figure 7A) as undifferentiated cells (UD), described in the text as baseline untreated hESCs. In fact, both panels show the GFP-overexpressing hESCs. Given the virtually indistinguishable behavior and appearance of the two control cell populations, this error does not alter any conclusions or interpretation in the manuscript.
  9 in total

Review 1.  Role of cyclins and cyclin-dependent kinases in pluripotent stem cells and their potential as a therapeutic target.

Authors:  Siwanon Jirawatnotai; Stephen Dalton; Methichit Wattanapanitch
Journal:  Semin Cell Dev Biol       Date:  2020-05-14       Impact factor: 7.727

2.  Esrrb is a cell-cycle-dependent associated factor balancing pluripotency and XEN differentiation.

Authors:  Sapir Herchcovici Levy; Sharon Feldman Cohen; Lee Arnon; Shlomtzion Lahav; Muhammad Awawdy; Adi Alajem; Danny Bavli; Xue Sun; Yosef Buganim; Oren Ram
Journal:  Stem Cell Reports       Date:  2022-05-19       Impact factor: 7.294

3.  Cell cycle gene regulation dynamics revealed by RNA velocity and deep-learning.

Authors:  Andrea Riba; Attila Oravecz; Matej Durik; Sara Jiménez; Violaine Alunni; Marie Cerciat; Matthieu Jung; Céline Keime; William M Keyes; Nacho Molina
Journal:  Nat Commun       Date:  2022-05-23       Impact factor: 17.694

4.  Planarian stem cells sense the identity of the missing pharynx to launch its targeted regeneration.

Authors:  Tisha E Bohr; Divya A Shiroor; Carolyn E Adler
Journal:  Elife       Date:  2021-06-22       Impact factor: 8.140

5.  BMP4 preserves the developmental potential of mESCs through Ube2s- and Chmp4b-mediated chromosomal stability safeguarding.

Authors:  Mingzhu Wang; Kun Zhao; Meng Liu; Mengting Wang; Zhibin Qiao; Shanru Yi; Yonghua Jiang; Xiaochen Kou; Yanhong Zhao; Jiqing Yin; Tianming Li; Hong Wang; Cizhong Jiang; Shaorong Gao; Jiayu Chen
Journal:  Protein Cell       Date:  2022-08       Impact factor: 15.328

6.  Fundamental limits on dynamic inference from single-cell snapshots.

Authors:  Caleb Weinreb; Samuel Wolock; Betsabeh K Tusi; Merav Socolovsky; Allon M Klein
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-20       Impact factor: 11.205

7.  Brief Report: Cell Cycle Dynamics of Human Pluripotent Stem Cells Primed for Differentiation.

Authors:  Anna Shcherbina; Jingling Li; Cyndhavi Narayanan; William Greenleaf; Anshul Kundaje; Sundari Chetty
Journal:  Stem Cells       Date:  2019-06-10       Impact factor: 6.277

8.  Nonhistone Proteins HMGB1 and HMGB2 Differentially Modulate the Response of Human Embryonic Stem Cells and the Progenitor Cells to the Anticancer Drug Etoposide.

Authors:  Alireza Jian Bagherpoor; Martin Kučírek; Radek Fedr; Soodabeh Abbasi Sani; Michal Štros
Journal:  Biomolecules       Date:  2020-10-15

9.  Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression.

Authors:  Anna S E Cuomo; Daniel D Seaton; Davis J McCarthy; Mariya Chhatriwala; Oliver Stegle; Iker Martinez; Marc Jan Bonder; Jose Garcia-Bernardo; Shradha Amatya; Pedro Madrigal; Abigail Isaacson; Florian Buettner; Andrew Knights; Kedar Nath Natarajan; Ludovic Vallier; John C Marioni
Journal:  Nat Commun       Date:  2020-02-10       Impact factor: 14.919

  9 in total

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