Literature DB >> 28891322

Data-Driven Topological Filtering Based on Orthogonal Minimal Spanning Trees: Application to Multigroup Magnetoencephalography Resting-State Connectivity.

Stavros I Dimitriadis1,2,3,4,5, Marios Antonakakis6, Panagiotis Simos7,8, Jack M Fletcher9, Andrew C Papanicolaou10,11.   

Abstract

In the present study, a novel data-driven topological filtering technique is introduced to derive the backbone of functional brain networks relying on orthogonal minimal spanning trees (OMSTs). The method aims to identify the essential functional connections to ensure optimal information flow via the objective criterion of global efficiency minus the cost of surviving connections. The OMST technique was applied to multichannel, resting-state neuromagnetic recordings from four groups of participants: healthy adults (n = 50), adults who have suffered mild traumatic brain injury (n = 30), typically developing children (n = 27), and reading-disabled children (n = 25). Weighted interactions between network nodes (sensors) were computed using an integrated approach of dominant intrinsic coupling modes based on two alternative metrics (symbolic mutual information and phase lag index), resulting in excellent discrimination of individual cases according to their group membership. Classification results using OMST-derived functional networks were clearly superior to results using either relative power spectrum features or functional networks derived through the conventional minimal spanning tree algorithm.

Entities:  

Keywords:  brain networks; network topology; optimization of information flow; resting state; topological filtering

Mesh:

Year:  2017        PMID: 28891322      PMCID: PMC6435350          DOI: 10.1089/brain.2017.0512

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  48 in total

Review 1.  The brainweb: phase synchronization and large-scale integration.

Authors:  F Varela; J P Lachaux; E Rodriguez; J Martinerie
Journal:  Nat Rev Neurosci       Date:  2001-04       Impact factor: 34.870

Review 2.  Neuronal oscillations in cortical networks.

Authors:  György Buzsáki; Andreas Draguhn
Journal:  Science       Date:  2004-06-25       Impact factor: 47.728

3.  EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis.

Authors:  Arnaud Delorme; Scott Makeig
Journal:  J Neurosci Methods       Date:  2004-03-15       Impact factor: 2.390

4.  Tracking brain dynamics via time-dependent network analysis.

Authors:  Stavros I Dimitriadis; Nikolaos A Laskaris; Vasso Tsirka; Michael Vourkas; Sifis Micheloyannis; Spiros Fotopoulos
Journal:  J Neurosci Methods       Date:  2010-09-09       Impact factor: 2.390

5.  Complex network measures of brain connectivity: uses and interpretations.

Authors:  Mikail Rubinov; Olaf Sporns
Journal:  Neuroimage       Date:  2009-10-09       Impact factor: 6.556

6.  Phase lag index: assessment of functional connectivity from multi channel EEG and MEG with diminished bias from common sources.

Authors:  Cornelis J Stam; Guido Nolte; Andreas Daffertshofer
Journal:  Hum Brain Mapp       Date:  2007-11       Impact factor: 5.038

Review 7.  The functional role of cross-frequency coupling.

Authors:  Ryan T Canolty; Robert T Knight
Journal:  Trends Cogn Sci       Date:  2010-11       Impact factor: 20.229

8.  Neuronal avalanches imply maximum dynamic range in cortical networks at criticality.

Authors:  Woodrow L Shew; Hongdian Yang; Thomas Petermann; Rajarshi Roy; Dietmar Plenz
Journal:  J Neurosci       Date:  2009-12-09       Impact factor: 6.167

Review 9.  Complex brain networks: graph theoretical analysis of structural and functional systems.

Authors:  Ed Bullmore; Olaf Sporns
Journal:  Nat Rev Neurosci       Date:  2009-02-04       Impact factor: 34.870

Review 10.  Small-world brain networks.

Authors:  Danielle Smith Bassett; Ed Bullmore
Journal:  Neuroscientist       Date:  2006-12       Impact factor: 7.519

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  25 in total

1.  Investigation of functional brain network reconfiguration during vocal emotional processing using graph-theoretical analysis.

Authors:  Shih-Yen Lin; Chi-Chun Lee; Yong-Sheng Chen; Li-Wei Kuo
Journal:  Soc Cogn Affect Neurosci       Date:  2019-05-31       Impact factor: 3.436

2.  How to Build a Functional Connectomic Biomarker for Mild Cognitive Impairment From Source Reconstructed MEG Resting-State Activity: The Combination of ROI Representation and Connectivity Estimator Matters.

Authors:  Stavros I Dimitriadis; María E López; Ricardo Bruña; Pablo Cuesta; Alberto Marcos; Fernando Maestú; Ernesto Pereda
Journal:  Front Neurosci       Date:  2018-06-01       Impact factor: 5.152

3.  Improving the Reliability of Network Metrics in Structural Brain Networks by Integrating Different Network Weighting Strategies into a Single Graph.

Authors:  Stavros I Dimitriadis; Mark Drakesmith; Sonya Bells; Greg D Parker; David E Linden; Derek K Jones
Journal:  Front Neurosci       Date:  2017-12-19       Impact factor: 4.677

4.  Functional Evolving Patterns of Cortical Networks in Progression of Alzheimer's Disease: A Graph-Based Resting-State fMRI Study.

Authors:  Wei Li; Wen Wen; Xi Chen; BingJie Ni; Xuefeng Lin; Wenliang Fan
Journal:  Neural Plast       Date:  2020-06-29       Impact factor: 3.599

Review 5.  A Comprehensive Review of Magnetoencephalography (MEG) Studies for Brain Functionality in Healthy Aging and Alzheimer's Disease (AD).

Authors:  Pravat K Mandal; Anwesha Banerjee; Manjari Tripathi; Ankita Sharma
Journal:  Front Comput Neurosci       Date:  2018-08-23       Impact factor: 2.380

6.  Reproducibility of graph measures at the subject level using resting-state fMRI.

Authors:  Qian Ran; Tarik Jamoulle; Jolien Schaeverbeke; Karen Meersmans; Rik Vandenberghe; Patrick Dupont
Journal:  Brain Behav       Date:  2020-07-02       Impact factor: 2.708

7.  Reliability of Static and Dynamic Network Metrics in the Resting-State: A MEG-Beamformed Connectivity Analysis.

Authors:  Stavros I Dimitriadis; Bethany Routley; David E Linden; Krish D Singh
Journal:  Front Neurosci       Date:  2018-08-03       Impact factor: 4.677

8.  Graph-to-signal transformation based classification of functional connectivity brain networks.

Authors:  Tamanna Tabassum Khan Munia; Selin Aviyente
Journal:  PLoS One       Date:  2019-08-22       Impact factor: 3.240

9.  Fronto-Parietal Subnetworks Flexibility Compensates For Cognitive Decline Due To Mental Fatigue.

Authors:  Fumihiko Taya; Stavros I Dimitriadis; Andrei Dragomir; Julian Lim; Yu Sun; Kian Foong Wong; Nitish V Thakor; Anastasios Bezerianos
Journal:  Hum Brain Mapp       Date:  2018-04-24       Impact factor: 5.038

10.  Altered Small-World Networks in First-Episode Schizophrenia Patients during Cool Executive Function Task.

Authors:  Zongya Zhao; Yaqing Cheng; Zhenxin Li; Yi Yu
Journal:  Behav Neurol       Date:  2018-09-05       Impact factor: 3.342

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