Literature DB >> 28885174

Advanced Applications of Next-Generation Sequencing Technologies to Orchid Biology.

Chuan-Ming Yeh1, Zhong-Jian Liu2, Wen-Chieh Tsai3.   

Abstract

Next-generation sequencing technologies are revolutionizing biology by permitting, transcriptome sequencing, whole-genome sequencing and resequencing, and genome-wide single nucleotide polymorphism profiling. Orchid research has benefited from this breakthrough, and a few orchid genomes are now available; new biological questions can be approached and new breeding strategies can be designed. The first part of this review describes the unique features of orchid biology. The second part provides an overview of the current next-generation sequencing platforms, many of which are already used in plant laboratories. The third part summarizes the state of orchid transcriptome and genome sequencing and illustrates current achievements. The genetic sequences currently obtained will not only provide a broad scope for the study of orchid biology, but also serves as a starting point for uncovering the mystery of orchid evolution.

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Year:  2017        PMID: 28885174     DOI: 10.21775/cimb.027.051

Source DB:  PubMed          Journal:  Curr Issues Mol Biol        ISSN: 1467-3037            Impact factor:   2.081


  3 in total

Review 1.  Genome-wide researches and applications on Dendrobium.

Authors:  Shi-Gang Zheng; Ya-Dong Hu; Ruo-Xi Zhao; Shou Yan; Xue-Qin Zhang; Ting-Mei Zhao; Ze Chun
Journal:  Planta       Date:  2018-07-31       Impact factor: 4.116

2.  Orchid Bsister gene PeMADS28 displays conserved function in ovule integument development.

Authors:  Ching-Yu Shen; You-Yi Chen; Ke-Wei Liu; Hsiang-Chia Lu; Song-Bin Chang; Yu-Yun Hsiao; Fengxi Yang; Genfa Zhu; Shuang-Quan Zou; Lai-Qiang Huang; Zhong-Jian Liu; Wen-Chieh Tsai
Journal:  Sci Rep       Date:  2021-01-13       Impact factor: 4.379

3.  Modeling of shotgun sequencing of DNA plasmids using experimental and theoretical approaches.

Authors:  Sergey Shityakov; Elena Bencurova; Carola Förster; Thomas Dandekar
Journal:  BMC Bioinformatics       Date:  2020-04-03       Impact factor: 3.169

  3 in total

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