| Literature DB >> 28884065 |
Pijush Mallick1,2, Shruti Chattaraj1, Samir Ranjan Sikdar1.
Abstract
The 12 pfls somatic hybrids and 2 parents of Pleurotus florida and Lentinus squarrosulus were characterized by ISSR and sequencing of rRNA-ITS genes. Five ISSR primers were used and amplified a total of 54 reproducible fragments with 98.14% polymorphism among all the pfls hybrid populations and parental strains. UPGMA-based cluster exhibited a dendrogram with three major groups between the parents and pfls hybrids. Parent P. florida and L. squarrosulus showed different degrees of genetic distance with all the hybrid lines and they showed closeness to hybrid pfls 1m and pfls 1h, respectively. ITS1(F) and ITS4(R) amplified the rRNA-ITS gene with 611-867 bp sequence length. The nucleotide polymorphisms were found in the ITS1, ITS2 and 5.8S rRNA region with different number of bases. Based on rRNA-ITS sequence, UPGMA cluster exhibited three distinct groups between L. squarrosulus and pfls 1p, pfls 1m and pfls 1s, and pfls 1e and P. florida.Entities:
Keywords: ISSR; Mushroom somatic hybrid; Polymorphism; rRNA-ITS gene
Year: 2017 PMID: 28884065 PMCID: PMC5587416 DOI: 10.1007/s13205-017-0931-2
Source DB: PubMed Journal: 3 Biotech ISSN: 2190-5738 Impact factor: 2.406