Literature DB >> 28882044

Host-Guest Tethered DNA Transducer: ATP Fueled Release of a Protein Inhibitor from Cucurbit[7]uril.

Xiao Zhou1, Xiaoye Su1, Pravin Pathak1, Ryan Vik1, Brittany Vinciguerra2, Lyle Isaacs2, Janarthanan Jayawickramarajah1.   

Abstract

Host-guest complexes are emerging as powerful components in functional systems with applications ranging from materials to biomedicine. In particular, CB7 based host-guest complexes have received much attention for the controlled release of drugs due to the remarkable ability of CB7 toward binding input molecules in water with high affinity leading to displacement of CB7 from included pharmacophores (or from drug loaded porous particles). However, the release of bound guests from CB7 in response to endogenous biological molecules remains limited since the input biomolecule needs to have the appropriate chemical structure to bind tightly into the CB7 cavity. Herein we describe a synthetic transducer based on self-assembling DNA-small molecule chimeras (DCs) that is capable of converting a chosen biological input, adenosine triphosphate (ATP; that does not directly bind to the CB7 host), into functional displacement of a protein inhibitor that is bound within the CB7 host. Our system-which features the first example of a covalent CB-DNA conjugate-is highly modular and can be adapted to enable responsiveness to other biologically/clinically relevant stimuli via its split DNA aptamer architecture.

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Year:  2017        PMID: 28882044      PMCID: PMC5784833          DOI: 10.1021/jacs.7b07977

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  52 in total

1.  Recognition properties of cucurbit[7]uril self-assembled monolayers studied with force spectroscopy.

Authors:  Alberto Gomez-Casado; Pascal Jonkheijm; Jurriaan Huskens
Journal:  Langmuir       Date:  2011-08-22       Impact factor: 3.882

Review 2.  Carbonic anhydrases: novel therapeutic applications for inhibitors and activators.

Authors:  Claudiu T Supuran
Journal:  Nat Rev Drug Discov       Date:  2008-02       Impact factor: 84.694

3.  Probing heterobivalent binding to the endocytic AP-2 adaptor complex by DNA-based spatial screening.

Authors:  F Diezmann; L von Kleist; V Haucke; O Seitz
Journal:  Org Biomol Chem       Date:  2015-06-29       Impact factor: 3.876

4.  Calculation of inhibitor Ki and inhibitor type from the concentration of inhibitor for 50% inhibition for Michaelis-Menten enzymes.

Authors:  R B Brandt; J E Laux; S W Yates
Journal:  Biochem Med Metab Biol       Date:  1987-06

5.  Fluorescent Sensors Based on Aptamer Self-Assembly.

Authors:  Milan N Stojanovic; Paloma de Prada; Donald W Landry
Journal:  J Am Chem Soc       Date:  2000-11-22       Impact factor: 15.419

6.  A naphthalimide derived fluorescent sensor for solid-phase screening of cucurbit[7]uril-guest interactions.

Authors:  Gyan Hari Aryal; Cooper Hawkins Battle; Tod A Grusenmeyer; Mengyuan Zhu; Janarthanan Jayawickramarajah
Journal:  Chem Commun (Camb)       Date:  2016-02-07       Impact factor: 6.222

7.  Intracellular ATP levels are a pivotal determinant of chemoresistance in colon cancer cells.

Authors:  Yunfei Zhou; Federico Tozzi; Jinyu Chen; Fan Fan; Ling Xia; Jinrong Wang; Guang Gao; Aijun Zhang; Xuefeng Xia; Heather Brasher; William Widger; Lee M Ellis; Zhang Weihua
Journal:  Cancer Res       Date:  2011-11-14       Impact factor: 12.701

8.  A stable bidentate protein binder achieved via DNA self-assembly driven ligand migration.

Authors:  Xiaoye Su; Xiao Zhou; Nan Zhang; Mengyuan Zhu; Hong Zhang; Janarthanan Jayawickramarajah
Journal:  Chem Commun (Camb)       Date:  2015-09-14       Impact factor: 6.222

9.  Mesoporous Silica Nanoparticles Coated by Layer-by-Layer Self-assembly Using Cucurbit[7]uril for in Vitro and in Vivo Anticancer Drug Release.

Authors:  Qing-Lan Li; Yanfang Sun; Yu-Long Sun; Jijie Wen; Yue Zhou; Qi-Ming Bing; Lyle D Isaacs; Yinghua Jin; Hui Gao; Ying-Wei Yang
Journal:  Chem Mater       Date:  2014-10-20       Impact factor: 9.811

10.  Reversible manipulation of the G-quadruplex structures and enzymatic reactions through supramolecular host-guest interactions.

Authors:  Tian Tian; Yanyan Song; Lai Wei; Jiaqi Wang; Boshi Fu; Zhiyong He; Xi-Ran Yang; Fan Wu; Guohua Xu; Si-Min Liu; Conggang Li; Shaoru Wang; Xiang Zhou
Journal:  Nucleic Acids Res       Date:  2017-03-17       Impact factor: 16.971

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  12 in total

1.  A gold nanoparticle based colorimetric and fluorescent dual-channel probe for acetylcholinesterase detection and inhibitor screening.

Authors:  Jie Lv; Binnan He; Na Wang; Meng Li; Yulong Lin
Journal:  RSC Adv       Date:  2018-09-24       Impact factor: 4.036

2.  Supramolecularly Engineered Circular Bivalent Aptamer for Enhanced Functional Protein Delivery.

Authors:  Ying Jiang; Xiaoshu Pan; Jin Chang; Weijia Niu; Weijia Hou; Hailan Kuai; Zilong Zhao; Ji Liu; Ming Wang; Weihong Tan
Journal:  J Am Chem Soc       Date:  2018-05-24       Impact factor: 15.419

3.  Chaperone-Assisted Host-Guest Interactions Revealed by Single-Molecule Force Spectroscopy.

Authors:  Shankar Pandey; Dilanka V D Walpita Kankanamalage; Xiao Zhou; Changpeng Hu; Lyle Isaacs; Janarthanan Jayawickramarajah; Hanbin Mao
Journal:  J Am Chem Soc       Date:  2019-11-11       Impact factor: 15.419

4.  Carborane Guests for Cucurbit[7]uril Facilitate Strong Binding and On-Demand Removal.

Authors:  Anna Kataki-Anastasakou; Jonathan C Axtell; Selena Hernandez; Rafal M Dziedzic; Gary J Balaich; Arnold L Rheingold; Alexander M Spokoyny; Ellen M Sletten
Journal:  J Am Chem Soc       Date:  2020-11-30       Impact factor: 16.383

5.  The Cucurbit[7]Uril-Based Supramolecular Chemistry for Reversible B/Z-DNA Transition.

Authors:  Shao-Ru Wang; Jia-Qi Wang; Guo-Hua Xu; Lai Wei; Bo-Shi Fu; Ling-Yu Wu; Yan-Yan Song; Xi-Ran Yang; Conggang Li; Si-Min Liu; Xiang Zhou
Journal:  Adv Sci (Weinh)       Date:  2018-05-15       Impact factor: 16.806

6.  A Sample Preparation Technique Using Biocompatible Composites for Biomedical Applications.

Authors:  Huifang Liu; Geun Su Noh; Yange Luan; Zhen Qiao; Bonhan Koo; Yoon Ok Jang; Yong Shin
Journal:  Molecules       Date:  2019-04-03       Impact factor: 4.411

Review 7.  DNA-supramolecule conjugates in theranostics.

Authors:  Kun Chen; Ting Fu; Weidi Sun; Qin Huang; Pengge Zhang; Zilong Zhao; Xiaobing Zhang; Weihong Tan
Journal:  Theranostics       Date:  2019-05-18       Impact factor: 11.556

8.  Synthetic Host-Guest Assembly in Cells and Tissues: Fast, Stable, and Selective Bioorthogonal Imaging via Molecular Recognition.

Authors:  Ranjan Sasmal; Nilanjana Das Saha; Meenakshi Pahwa; Sushma Rao; Divyesh Joshi; Maneesha S Inamdar; Vasu Sheeba; Sarit S Agasti
Journal:  Anal Chem       Date:  2018-09-12       Impact factor: 6.986

9.  Decorating bacteria with self-assembled synthetic receptors.

Authors:  Naama Lahav-Mankovski; Pragati Kishore Prasad; Noa Oppenheimer-Low; Gal Raviv; Tali Dadosh; Tamar Unger; Tomer Meir Salame; Leila Motiei; David Margulies
Journal:  Nat Commun       Date:  2020-03-10       Impact factor: 14.919

Review 10.  DNA Nanodevice-Based Drug Delivery Systems.

Authors:  Chaoyang Guan; Xiaoli Zhu; Chang Feng
Journal:  Biomolecules       Date:  2021-12-10
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