Literature DB >> 28881037

Comparison of vessel enhancement algorithms applied to time-of-flight MRA images for cerebrovascular segmentation.

Renzo Phellan1, Nils D Forkert1.   

Abstract

PURPOSE: Vessel enhancement algorithms are often used as a preprocessing step for vessel segmentation in medical images to improve the overall segmentation accuracy. Each algorithm uses different characteristics to enhance vessels, such that the most suitable algorithm may vary for different applications. This paper presents a comparative analysis of the accuracy gains in vessel segmentation generated by the use of nine vessel enhancement algorithms: Multiscale vesselness using the formulas described by Erdt (MSE), Frangi (MSF), and Sato (MSS), optimally oriented flux (OOF), ranking orientations responses path operator (RORPO), the regularized Perona-Malik approach (RPM), vessel enhanced diffusion (VED), hybrid diffusion with continuous switch (HDCS), and the white top hat algorithm (WTH).
METHODS: The filters were evaluated and compared based on time-of-flight MRA datasets and corresponding manual segmentations from 5 healthy subjects and 10 patients with an arteriovenous malformation. Additionally, five synthetic angiographic datasets with corresponding ground truth segmentation were generated with three different noise levels (low, medium, and high) and also used for comparison. The parameters for each algorithm and subsequent segmentation were optimized using leave-one-out cross evaluation. The Dice coefficient, Matthews correlation coefficient, area under the ROC curve, number of connected components, and true positives were used for comparison.
RESULTS: The results of this study suggest that vessel enhancement algorithms do not always lead to more accurate segmentation results compared to segmenting nonenhanced images directly. Multiscale vesselness algorithms, such as MSE, MSF, and MSS proved to be robust to noise, while diffusion-based filters, such as RPM, VED, and HDCS ranked in the top of the list in scenarios with medium or no noise. Filters that assume tubular-shapes, such as MSE, MSF, MSS, OOF, RORPO, and VED show a decrease in accuracy when considering patients with an AVM, because vessels may vary from its tubular-shape in this case.
CONCLUSIONS: Vessel enhancement algorithms can help to improve the accuracy of the segmentation of the vascular system. However, their contribution to accuracy has to be evaluated as it depends on the specific applications, and in some cases it can lead to a reduction of the overall accuracy. No specific filter was suitable for all tested scenarios.
© 2017 American Association of Physicists in Medicine.

Entities:  

Keywords:  cerebrovascular segmentation; vessel enhancement; vessel segmentation

Mesh:

Year:  2017        PMID: 28881037     DOI: 10.1002/mp.12560

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  5 in total

Review 1.  Segmentation techniques of brain arteriovenous malformations for 3D visualization: a systematic review.

Authors:  Elisa Colombo; Tim Fick; Giuseppe Esposito; Menno Germans; Luca Regli; Tristan van Doormaal
Journal:  Radiol Med       Date:  2022-10-18       Impact factor: 6.313

2.  A Fully Automated Method for Segmenting Arteries and Quantifying Vessel Radii on Magnetic Resonance Angiography Images of Varying Projection Thickness.

Authors:  Sivakami Avadiappan; Seyedmehdi Payabvash; Melanie A Morrison; Angela Jakary; Christopher P Hess; Janine M Lupo
Journal:  Front Neurosci       Date:  2020-06-16       Impact factor: 4.677

3.  DeepVesselNet: Vessel Segmentation, Centerline Prediction, and Bifurcation Detection in 3-D Angiographic Volumes.

Authors:  Giles Tetteh; Velizar Efremov; Nils D Forkert; Matthias Schneider; Jan Kirschke; Bruno Weber; Claus Zimmer; Marie Piraud; Björn H Menze
Journal:  Front Neurosci       Date:  2020-12-08       Impact factor: 4.677

4.  Imaging of the pial arterial vasculature of the human brain in vivo using high-resolution 7T time-of-flight angiography.

Authors:  Saskia Bollmann; Hendrik Mattern; Michaël Bernier; Simon D Robinson; Daniel Park; Oliver Speck; Jonathan R Polimeni
Journal:  Elife       Date:  2022-04-29       Impact factor: 8.713

5.  The Effect of Vascular Segmentation Methods on Stereotactic Trajectory Planning for Drug-Resistant Focal Epilepsy: A Retrospective Cohort Study.

Authors:  Vejay N Vakharia; Rachel Sparks; Sjoerd B Vos; Andrew W McEvoy; Anna Miserocchi; Sebastien Ourselin; John S Duncan
Journal:  World Neurosurg X       Date:  2019-08-05
  5 in total

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