Literature DB >> 28880077

Loss of Fourth Electron-Transferring Tryptophan in Animal (6-4) Photolyase Impairs DNA Repair Activity in Bacterial Cells.

Junpei Yamamoto1, Kohei Shimizu1, Takahiro Kanda1, Yuhei Hosokawa1, Shigenori Iwai1, Pascal Plaza2,3, Pavel Müller4.   

Abstract

(6-4) photolyases [(6-4)PLs] are flavoproteins that use blue light to repair the ultraviolet-induced pyrimidine(6-4)pyrimidone photoproduct in DNA. Their flavin adenine dinucleotide (FAD) cofactor can be reduced to its repair-active FADH- form by a photoinduced electron transfer reaction. In animal (6-4)PLs, a chain of four Trp residues was suggested to be involved in a stepwise transfer of an oxidation hole from the flavin to the surface of the protein. Here, we investigated the effect of mutation of the fourth Trp on the DNA photorepair activity of Xenopus laevis (6-4)PL (Xl64) in bacterial cells. The photoreduction and photorepair properties of this mutant protein were independently characterized in vitro. Our results demonstrate that the mutation of the fourth Trp in Xl64 drastically impairs the DNA repair activity in cells and that this effect is due to the inhibition of the photoreduction process. We thereby show that the photoreductive formation of FADH- through the Trp tetrad is essential for the biological function of the animal (6-4)PL. The role of the Trp cascade, and of the fourth Trp in particular, is discussed.

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Year:  2017        PMID: 28880077     DOI: 10.1021/acs.biochem.7b00366

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

1.  Ultrafast photoreduction dynamics of a new class of CPD photolyases.

Authors:  Fabien Lacombat; Agathe Espagne; Nadia Dozova; Pascal Plaza; Pavel Müller; Hans-Joachim Emmerich; Martin Saft; Lars-Oliver Essen
Journal:  Photochem Photobiol Sci       Date:  2021-05-11       Impact factor: 3.982

2.  Key interactions with deazariboflavin cofactor for light-driven energy transfer in Xenopus (6-4) photolyase.

Authors:  Ayaka Morimoto; Yuhei Hosokawa; Hiromu Miyamoto; Rajiv Kumar Verma; Shigenori Iwai; Ryuma Sato; Junpei Yamamoto
Journal:  Photochem Photobiol Sci       Date:  2021-06-13       Impact factor: 3.982

3.  Coulomb and CH-π interactions in (6-4) photolyase-DNA complex dominate DNA binding and repair abilities.

Authors:  Yuma Terai; Ryuma Sato; Takahiro Yumiba; Ryuhei Harada; Kohei Shimizu; Tatsuya Toga; Tomoko Ishikawa-Fujiwara; Takeshi Todo; Shigenori Iwai; Yasuteru Shigeta; Junpei Yamamoto
Journal:  Nucleic Acids Res       Date:  2018-07-27       Impact factor: 16.971

4.  Sub-nanosecond tryptophan radical deprotonation mediated by a protein-bound water cluster in class II DNA photolyases.

Authors:  Pavel Müller; Elisabeth Ignatz; Stephan Kiontke; Klaus Brettel; Lars-Oliver Essen
Journal:  Chem Sci       Date:  2017-12-11       Impact factor: 9.825

5.  Structural basis of the radical pair state in photolyases and cryptochromes.

Authors:  Andrea Cellini; Madan Kumar Shankar; Weixiao Yuan Wahlgren; Amke Nimmrich; Antonia Furrer; Daniel James; Maximilian Wranik; Sylvain Aumonier; Emma V Beale; Florian Dworkowski; Jörg Standfuss; Tobias Weinert; Sebastian Westenhoff
Journal:  Chem Commun (Camb)       Date:  2022-04-14       Impact factor: 6.222

Review 6.  DNA damage repair: historical perspectives, mechanistic pathways and clinical translation for targeted cancer therapy.

Authors:  Ruixue Huang; Ping-Kun Zhou
Journal:  Signal Transduct Target Ther       Date:  2021-07-09

7.  Structure of the bifunctional cryptochrome aCRY from Chlamydomonas reinhardtii.

Authors:  Sophie Franz; Elisabeth Ignatz; Sandra Wenzel; Hannah Zielosko; Eka Putra Gusti Ngurah Putu; Manuel Maestre-Reyna; Ming-Daw Tsai; Junpei Yamamoto; Maria Mittag; Lars-Oliver Essen
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

8.  Limited solvation of an electron donating tryptophan stabilizes a photoinduced charge-separated state in plant (6-4) photolyase.

Authors:  Yuhei Hosokawa; Pavel Müller; Hirotaka Kitoh-Nishioka; Shigenori Iwai; Junpei Yamamoto
Journal:  Sci Rep       Date:  2022-03-24       Impact factor: 4.379

9.  The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature.

Authors:  Andrea Cellini; Weixiao Yuan Wahlgren; Léocadie Henry; Suraj Pandey; Swagatha Ghosh; Leticia Castillon; Elin Claesson; Heikki Takala; Joachim Kübel; Amke Nimmrich; Valentyna Kuznetsova; Eriko Nango; So Iwata; Shigeki Owada; Emina A Stojković; Marius Schmidt; Janne A Ihalainen; Sebastian Westenhoff
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-07-29       Impact factor: 7.652

  9 in total

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