Literature DB >> 28876228

HicAB toxin-antitoxin complex from Escherichia coli: expression and crystallization.

Jingsi Yang1, Bingshuang Xu2, Zengqiang Gao2, Ke Zhou2, Peng Liu2, Yuhui Dong2, Jianjun Zhang1, Quansheng Liu2.   

Abstract

Toxin-antitoxin (TA) systems are widespread in both bacteria and archaea, where they enable cells to adapt to environmental cues. TA systems play crucial roles in various cellular processes, such as programmed cell death, cell growth, persistence and virulence. Here, two distinct forms of the type II toxin-antitoxin complex HicAB were identified and characterized in Escherichia coli K-12, and both were successfully overexpressed and purified. The two proposed forms, HicABL and HicABS, differed in the presence or absence of a seven-amino-acid segment at the N-terminus in the antitoxin HicB. The short form HicABS readily crystallized under the conditions 0.1 M Tris-HCl pH 8.0, 20%(w/v) PEG 6000, 0.2 M ammonium sulfate. The HicABS crystal diffracted and data were collected to 2.5 Å resolution. The crystal belonged to space group I222 or I212121, with unit-cell parameters a = 67.04, b = 66.31, c = 120.78 Å. Matthews coefficient calculation suggested the presence of two molecules each of HicA and HicBS in the asymmetric unit, with a solvent content of 55.28% and a Matthews coefficient (VM) of 2.75 Å3 Da-1.

Entities:  

Keywords:  Escherichia coli; HicAB; cell stress; persister cells; toxin–antitoxin systems

Mesh:

Substances:

Year:  2017        PMID: 28876228      PMCID: PMC5619741          DOI: 10.1107/S2053230X17011529

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  20 in total

Review 1.  Toxin-antitoxin systems in bacteria and archaea.

Authors:  Yoshihiro Yamaguchi; Jung-Ho Park; Masayori Inouye
Journal:  Annu Rev Genet       Date:  2011       Impact factor: 16.830

Review 2.  Toxin-antitoxin modules as bacterial metabolic stress managers.

Authors:  Lieven Buts; Jurij Lah; Minh-Hoa Dao-Thi; Lode Wyns; Remy Loris
Journal:  Trends Biochem Sci       Date:  2005-10-28       Impact factor: 13.807

Review 3.  Prokaryotic toxin-antitoxin stress response loci.

Authors:  Kenn Gerdes; Susanne K Christensen; Anders Løbner-Olesen
Journal:  Nat Rev Microbiol       Date:  2005-05       Impact factor: 60.633

4.  The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria.

Authors:  Kira S Makarova; Nick V Grishin; Eugene V Koonin
Journal:  Bioinformatics       Date:  2006-08-08       Impact factor: 6.937

5.  Prevalence of hicAB, lav, traA, and hifBC among Haemophilus influenzae middle ear and throat strains.

Authors:  Salma S Syed; Janet R Gilsdorf
Journal:  FEMS Microbiol Lett       Date:  2007-06-30       Impact factor: 2.742

6.  HicA of Escherichia coli defines a novel family of translation-independent mRNA interferases in bacteria and archaea.

Authors:  Mikkel G Jørgensen; Deo P Pandey; Milena Jaskolska; Kenn Gerdes
Journal:  J Bacteriol       Date:  2008-12-05       Impact factor: 3.490

Review 7.  Toxins-antitoxins: plasmid maintenance, programmed cell death, and cell cycle arrest.

Authors:  Finbarr Hayes
Journal:  Science       Date:  2003-09-12       Impact factor: 47.728

8.  The Yersinia pestis chromosome encodes active addiction toxins.

Authors:  Céline Goulard; Sophie Langrand; Elisabeth Carniel; Sylvie Chauvaux
Journal:  J Bacteriol       Date:  2010-05-14       Impact factor: 3.490

9.  A suppressor of cell death caused by the loss of sigmaE downregulates extracytoplasmic stress responses and outer membrane vesicle production in Escherichia coli.

Authors:  Julie E Button; Thomas J Silhavy; Natividad Ruiz
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

10.  Identification of type II toxin-antitoxin modules in Burkholderia pseudomallei.

Authors:  Aaron Butt; Claudia Müller; Nicholas Harmer; Richard W Titball
Journal:  FEMS Microbiol Lett       Date:  2012-11-16       Impact factor: 2.742

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  1 in total

1.  Burkholderia cenocepacia Prophages-Prevalence, Chromosome Location and Major Genes Involved.

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Journal:  Viruses       Date:  2018-05-31       Impact factor: 5.048

  1 in total

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