| Literature DB >> 28871673 |
Chuan Liu1, Yu-Xin Zhang1, Yue Liu1, Yi-Long Chen1, Gang Fan1, Li Xiang2, Jiang Xu2, Yi Zhang1.
Abstract
The ITS2 barcode was used toidentify Tibetan medicine "Dida", and tosecure its quality and safety in medication. A total of 13 species, 151 experimental samples for the study from the Tibetan Plateau, including Gentianaceae Swertia, Halenia, Gentianopsis, Comastoma, Lomatogonium ITS2 sequences were amplified, and purified PCR products were sequenced. Sequence assembly and consensus sequence generation were performed using the CodonCode Aligner V3.7.1. The Kimura 2-Parameter (K2P) distances were calculated using MEGA 6.0. The neighbor-joining (NJ) phylogenetic trees were constructed. There are 31 haplotypes among 231 bp after alignment of all ITS2 sequence haplotypes, and the average G±C content of 61.40%. The NJ tree strongly supported that every species clustered into their own clade and high identification success rate, except that Swertia bifolia and Swertia wolfangiana could not be distinguished from each other based on the sequence divergences. DNA barcoding could be used as a fast and accurate identification method to distinguish Tibetan medicine "Dida" to ensure its safe use. Copyright© by the Chinese Pharmaceutical Association.Entities:
Keywords: "Dida" ; DNA barcoding ; Gentianaceae ; ITS2 ; Tibetan medicina ; species identification
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Year: 2016 PMID: 28871673 DOI: 10.4268/cjcmm20160403
Source DB: PubMed Journal: Zhongguo Zhong Yao Za Zhi ISSN: 1001-5302