Literature DB >> 28869270

Proteomic and genetic analysis of the response of S. cerevisiae to soluble copper leads to improvement of the antimicrobial function of cellulosic copper nanoparticles.

Xiaoqing Rong-Mullins1, Matthew J Winans1, Justin B Lee1, Zachery R Lonergan1, Vincent A Pilolli1, Lyndsey M Weatherly1, Thomas W Carmenzind2, Lihua Jiang3, Jonathan R Cumming1, Gloria S Oporto4, Jennifer E G Gallagher1.   

Abstract

Copper (Cu) was used in antiquity to prevent waterborne and food diseases because, as a broad-spectrum antimicrobial agent, it generates reactive oxygen species, ROS. New technologies incorporating Cu into low-cost biodegradable nanomaterials built on cellulose, known as cellulosic cupric nanoparticles or c-CuNPs, present novel approaches to deliver Cu in a controlled manner to control microbial growth. We challenged strains of Saccharomyces cerevisiae with soluble Cu and c-CuNPs to evaluate the potential of c-CuNPs as antifungal agents. Cells exposed to c-CuNPs demonstrated greater sensitivity to Cu than cells exposed to soluble Cu, although Cu-resistant strains were more tolerant than Cu-sensitive strains of c-CuNP exposure. At the same level of growth inhibition, 157 μM c-CuNPs led to the same internal Cu levels as did 400 μM CuSO4, offering evidence for alternative mechanisms of toxicity, perhaps through β-arrestin dependent endocytosis, which was supported by flow cytometry and fluorescence microscopy of c-CuNPs distributed both on the cell surface and within the cytoplasm. Genes responsible for genetic variation in response to copper were mapped to the ZRT2 and the CUP1 loci. Through proteomic analyses, we found that the expression of other zinc (Zn) transporters increased in Cu-tolerant yeast compared to Cu-sensitive strains. Further, the addition of Zn at low levels increased the potency of c-CuNPs to inhibit even the most Cu-tolerant yeast. Through unbiased systems biological approaches, we identified Zn as a critical component of the yeast response to Cu and the addition of Zn increased the potency of the c-CuNPs.

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Year:  2017        PMID: 28869270      PMCID: PMC5741080          DOI: 10.1039/c7mt00147a

Source DB:  PubMed          Journal:  Metallomics        ISSN: 1756-5901            Impact factor:   4.526


  55 in total

1.  Saccharomyces cerevisiae and Neurospora crassa contain heavy metal sequestering phytochelatin.

Authors:  R Kneer; T M Kutchan; A Hochberger; M H Zenk
Journal:  Arch Microbiol       Date:  1992       Impact factor: 2.552

2.  Combination of FASP and StageTip-based fractionation allows in-depth analysis of the hippocampal membrane proteome.

Authors:  Jacek R Wiśniewski; Alexandre Zougman; Matthias Mann
Journal:  J Proteome Res       Date:  2009-12       Impact factor: 4.466

3.  Epidemiological investigation of vaginal Saccharomyces cerevisiae isolates by a genotypic method.

Authors:  M J McCullough; K V Clemons; C Farina; J H McCusker; D A Stevens
Journal:  J Clin Microbiol       Date:  1998-02       Impact factor: 5.948

4.  Phytochelatins are synthesized by two vacuolar serine carboxypeptidases in Saccharomyces cerevisiae.

Authors:  Jana Wünschmann; Andreas Beck; Laurent Meyer; Thomas Letzel; Erwin Grill; Klaus J Lendzian
Journal:  FEBS Lett       Date:  2007-03-28       Impact factor: 4.124

5.  Three cell wall mannoproteins facilitate the uptake of iron in Saccharomyces cerevisiae.

Authors:  O Protchenko; T Ferea; J Rashford; J Tiedeman; P O Brown; D Botstein; C C Philpott
Journal:  J Biol Chem       Date:  2001-10-22       Impact factor: 5.157

6.  The FET3 gene of S. cerevisiae encodes a multicopper oxidase required for ferrous iron uptake.

Authors:  C Askwith; D Eide; A Van Ho; P S Bernard; L Li; S Davis-Kaplan; D M Sipe; J Kaplan
Journal:  Cell       Date:  1994-01-28       Impact factor: 41.582

7.  Genetic analysis of variation in transcription factor binding in yeast.

Authors:  Wei Zheng; Hongyu Zhao; Eugenio Mancera; Lars M Steinmetz; Michael Snyder
Journal:  Nature       Date:  2010-03-17       Impact factor: 49.962

8.  Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C.

Authors:  F Winston; C Dollard; S L Ricupero-Hovasse
Journal:  Yeast       Date:  1995-01       Impact factor: 3.239

9.  Genome renewal: a new phenomenon revealed from a genetic study of 43 strains of Saccharomyces cerevisiae derived from natural fermentation of grape musts.

Authors:  R K Mortimer; P Romano; G Suzzi; M Polsinelli
Journal:  Yeast       Date:  1994-12       Impact factor: 3.239

10.  Global transcriptome and deletome profiles of yeast exposed to transition metals.

Authors:  Yong Hwan Jin; Paul E Dunlap; Sandra J McBride; Hanan Al-Refai; Pierre R Bushel; Jonathan H Freedman
Journal:  PLoS Genet       Date:  2008-04-25       Impact factor: 5.917

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  11 in total

1.  Copper blocks V-ATPase activity and SNARE complex formation to inhibit yeast vacuole fusion.

Authors:  Gregory E Miner; Katherine D Sullivan; Chi Zhang; Logan R Hurst; Matthew L Starr; David A Rivera-Kohr; Brandon C Jones; Annie Guo; Rutilio A Fratti
Journal:  Traffic       Date:  2019-09-02       Impact factor: 6.215

2.  Proteins and RNA sequences required for the transition of the t-Utp complex into the SSU processome.

Authors:  Jennifer E G Gallagher
Journal:  FEMS Yeast Res       Date:  2019-01-01       Impact factor: 2.796

3.  Enhancement of Copper Uptake of Yeast Through Systematic Optimization of Medium and the Cultivation Process of Saccharomyces cerevisiae.

Authors:  Xue-Na Guo; Xiao-Xian He; Li-Bin Zhang; Yan-Fei Cheng; Xiu-Mei Bai; Zhao-Yue Wang; Xiu-Ping He
Journal:  Appl Biochem Biotechnol       Date:  2022-01-05       Impact factor: 2.926

4.  Transcriptional Profiling of Saccharomyces cerevisiae Reveals the Impact of Variation of a Single Transcription Factor on Differential Gene Expression in 4NQO, Fermentable, and Nonfermentable Carbon Sources.

Authors:  Xiaoqing Rong-Mullins; Michael C Ayers; Mahmoud Summers; Jennifer E G Gallagher
Journal:  G3 (Bethesda)       Date:  2018-02-02       Impact factor: 3.154

5.  Enhancing research for undergraduates through a nanotechnology training program that utilizes analytical and bioanalytical tools.

Authors:  Lisa A Holland; Jeffrey S Carver; Lindsay M Veltri; Rachel J Henderson; Kimberly D Quedado
Journal:  Anal Bioanal Chem       Date:  2018-08-18       Impact factor: 4.142

6.  Characterization and mechanism of the effects of Mg-Fe layered double hydroxide nanoparticles on a marine bacterium: new insights from genomic and transcriptional analyses.

Authors:  Wei Ren; Yanshuai Ding; Lide Gu; Wanli Yan; Cang Wang; Mingsheng Lyu; Changhai Wang; Shujun Wang
Journal:  Biotechnol Biofuels       Date:  2019-08-16       Impact factor: 6.040

7.  MCHM Acts as a Hydrotrope, Altering the Balance of Metals in Yeast.

Authors:  Amaury Pupo; Michael C Ayers; Zachary N Sherman; Rachel J Vance; Jonathan R Cumming; Jennifer E G Gallagher
Journal:  Biol Trace Elem Res       Date:  2019-08-07       Impact factor: 3.738

8.  The Polymorphic PolyQ Tail Protein of the Mediator Complex, Med15, Regulates the Variable Response to Diverse Stresses.

Authors:  Jennifer E G Gallagher; Suk Lan Ser; Michael C Ayers; Casey Nassif; Amaury Pupo
Journal:  Int J Mol Sci       Date:  2020-03-10       Impact factor: 5.923

9.  Genetic variation in Dip5, an amino acid permease, and Pdr5, a multiple drug transporter, regulates glyphosate resistance in S. cerevisiae.

Authors:  Xiaoqing Rong-Mullins; Apoorva Ravishankar; Kirsten A McNeal; Zachery R Lonergan; Audrey C Biega; J Philip Creamer; Jennifer E G Gallagher
Journal:  PLoS One       Date:  2017-11-20       Impact factor: 3.240

10.  Resistance Mechanisms of Saccharomyces cerevisiae to Commercial Formulations of Glyphosate Involve DNA Damage Repair, the Cell Cycle, and the Cell Wall Structure.

Authors:  Apoorva Ravishankar; Amaury Pupo; Jennifer E G Gallagher
Journal:  G3 (Bethesda)       Date:  2020-06-01       Impact factor: 3.154

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