Literature DB >> 28866789

Population data and forensic efficiency of 21 autosomal STR loci included in AGCU EX22 amplification system in the Wanzhou Han population.

Xing Zou1, Yongguo Li1, Zehong Wei1, Ting Wang1, Yue Hu1, Ying Zhu1, Jianbo Li1, Renkuan Tang2.   

Abstract

Autosomal short tandem repeats (STRs), widely distributed in the whole human genome, play an important role in personal identification and parentage testing. In this study, the allele frequencies and forensic efficiency parameters of 21 autosomal STR loci included in the AGCU EX22 kit were obtained from 433 Chinese Han individuals residing in the Wanzhou District in the north of Chongqing Municipality, Southwest China. No deviation from Hardy-Weinberg equilibrium was observed in all of the 21 STR loci. A total of 241 alleles were observed with allele frequencies ranging from 0.0011 to 0.5418. The cumulative power of discrimination and the cumulative probability of exclusion were 0.9999999999999999999999999 and 0.999999996, respectively. The results of genetic distance, neighbor-joining tree, principal component plots, and multidimensional scaling analysis revealed that the Wanzhou Han had more genetic differences when compared with Kazakh and Uyghur populations from Xinjiang than other included reference populations. In summary, the results in forensic characteristic analyses indicated that the 21 STRs are highly polymorphic and can be served as a useful tool in forensic routine practices. The population comparison indicated that close geographic or ethnic origin groups had a strong genetic affinity with each other.

Entities:  

Keywords:  Genetic polymorphism; Population genetic; Short tandem repeat (STR)

Mesh:

Year:  2017        PMID: 28866789     DOI: 10.1007/s00414-017-1680-9

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  8 in total

Review 1.  Encoded evidence: DNA in forensic analysis.

Authors:  Mark A Jobling; Peter Gill
Journal:  Nat Rev Genet       Date:  2004-10       Impact factor: 53.242

2.  Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows.

Authors:  Laurent Excoffier; Heidi E L Lischer
Journal:  Mol Ecol Resour       Date:  2010-03-01       Impact factor: 7.090

3.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

4.  Genetic diversity of 21 autosomal STR loci in the Han population from Sichuan province, Southwest China.

Authors:  Guanglin He; Ye Li; Zheng Wang; Weibo Liang; Haibo Luo; Miao Liao; Ji Zhang; Jing Yan; Yingbi Li; Yiping Hou; Jin Wu
Journal:  Forensic Sci Int Genet       Date:  2017-07-17       Impact factor: 4.882

5.  Genetic polymorphisms for 19 autosomal STR loci of Chongqing Han ethnicity and phylogenetic structure exploration among 28 Chinese populations.

Authors:  Xing Zou; YongGuo Li; Ping Li; QianYun Nie; Ting Wang; Yue Hu; Ying Zhu; JianBo Li; RenKuan Tang
Journal:  Int J Legal Med       Date:  2017-03-24       Impact factor: 2.686

6.  Forensic characteristics and phylogenetic analyses of the Chinese Yi population via 19 X-chromosomal STR loci.

Authors:  GuangLin He; Ye Li; Xing Zou; Ping Li; PengYu Chen; Feng Song; Tianzhen Gao; Miao Liao; Jing Yan; Jin Wu
Journal:  Int J Legal Med       Date:  2017-02-28       Impact factor: 2.686

7.  Genetic polymorphism investigation of the Chinese Yi minority using PowerPlex® Y23 STR amplification system.

Authors:  GuangLin He; PengYu Chen; Xing Zou; Xu Chen; Feng Song; Jing Yan; YiPing Hou
Journal:  Int J Legal Med       Date:  2017-01-16       Impact factor: 2.686

Review 8.  Improving human forensics through advances in genetics, genomics and molecular biology.

Authors:  Manfred Kayser; Peter de Knijff
Journal:  Nat Rev Genet       Date:  2011-03       Impact factor: 53.242

  8 in total
  1 in total

1.  Evaluation genotypes of cancer cell lines HCC1954 and SiHa by short tandem repeat (STR) analysis and DNA sequencing.

Authors:  Jiewen Fu; Jingliang Cheng; Xiaoyan Liu; Jun Li; Chunli Wei; Xiaoli Zheng; Tao He; Junjiang Fu
Journal:  Mol Biol Rep       Date:  2018-11-02       Impact factor: 2.316

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.