Literature DB >> 28862456

Controlling Protein Orientation in Vacuum Using Electric Fields.

Erik G Marklund1,2, Tomas Ekeberg3, Mathieu Moog4, Justin L P Benesch2, Carl Caleman3,4.   

Abstract

Single-particle imaging using X-ray free-electron lasers is an emerging technique that could provide high-resolution structures of macromolecules in the gas phase. One of the largest difficulties in realizing this goal is the unknown orientation of the individual sample molecules at the time of exposure. Preorientation of the molecules has been identified as a possible solution to this problem. Using molecular dynamics simulations, we identify a range of electric field strengths where proteins become oriented without losing their structure. For a number of experimentally relevant cases we show that structure determination is possible only when orientation information is included in the orientation-recovery process. We conclude that nondestructive field orientation of intact proteins is feasible and that it enables a range of new structural investigations with single-particle imaging.

Year:  2017        PMID: 28862456     DOI: 10.1021/acs.jpclett.7b02005

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  6 in total

1.  Native mass spectrometry provides sufficient ion flux for XFEL single-particle imaging.

Authors:  Charlotte Uetrecht; Kristina Lorenzen; Matthäus Kitel; Johannes Heidemann; Jesse Huron Robinson Spencer; Hartmut Schlüter; Joachim Schulz
Journal:  J Synchrotron Radiat       Date:  2019-04-11       Impact factor: 2.616

2.  Molecular dynamics simulation of the nanosecond pulsed electric field effect on kinesin nanomotor.

Authors:  Jiří Průša; Michal Cifra
Journal:  Sci Rep       Date:  2019-12-23       Impact factor: 4.379

3.  Structural Heterogeneity in Single Particle Imaging Using X-ray Lasers.

Authors:  Thomas Mandl; Christofer Östlin; Ibrahim E Dawod; Maxim N Brodmerkel; Erik G Marklund; Andrew V Martin; Nicusor Timneanu; Carl Caleman
Journal:  J Phys Chem Lett       Date:  2020-07-16       Impact factor: 6.475

4.  Electro-opening of a microtubule lattice in silico.

Authors:  Jiří Průša; Ahmed Taha Ayoub; Djamel Eddine Chafai; Daniel Havelka; Michal Cifra
Journal:  Comput Struct Biotechnol J       Date:  2021-03-04       Impact factor: 7.271

5.  Protein orientation in time-dependent electric fields: orientation before destruction.

Authors:  Anna Sinelnikova; Thomas Mandl; Harald Agelii; Oscar Grånäs; Erik G Marklund; Carl Caleman; Emiliano De Santis
Journal:  Biophys J       Date:  2021-07-23       Impact factor: 3.699

6.  Reproducibility in the unfolding process of protein induced by an external electric field.

Authors:  Anna Sinelnikova; Thomas Mandl; Christofer Östlin; Oscar Grånäs; Maxim N Brodmerkel; Erik G Marklund; Carl Caleman
Journal:  Chem Sci       Date:  2020-12-26       Impact factor: 9.825

  6 in total

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