| Literature DB >> 28860538 |
Yanyan Zhao1, Junfang Wei1, Xuefeng Hou2, Huimiao Liu3, Feng Guo1, Yingni Zhou1, Yuanyuan Zhang1, Yunhui Qu4, Junfei Gu2, Yuanli Zhou2, Xiaobin Jia2, Guijun Qin5, Liang Feng6.
Abstract
SIRT1 and FOXO1 play an important role in the pathogenesis of diabetic nephropathy (DN). However, the association between genetic polymorphisms and susceptibility to type 2 DN (T2DN) has not been explored. In this study, a total of 1066 patients with type 2 diabetes mellitus (T2DM) (413 without and 653 with DN) were enrolled. The genotypes of three htSNPs (rs3818292, rs4746720, rs10823108) within SIRT1 and two htSNPs (rs2721068, rs17446614) in FOXO1 were determined by PCR-RFLP. HbA1C, LDL, HDL, TC, and TG levels were also examined. SIRT1 rs10823108 AA genotype was significantly associated with a decreased risk of DN (OR = 0.60, 95%CI: 0.38-0.97), while GA genotype (OR = 1.77, 95%CI: 1.33-2.35) and AA genotype (OR = 2.32, 95%CI: 1.25-4.34) of FOXO1 rs17446614 was associated with an increased T2DN risk. The interactions among rs1744 6614, BMI and duration of diabetes (OR: 2.63, 95%CI: 1.23-4.31) were also observed. Subsequent haplotype analysis revealed that two haplotype defined by AC (OR: 1.50, 95%CI: 1.15-1.94) and AT (OR: 1.79, 95%CI: 1.06-2.80) within FOXO1 gene may increase the risk of T2DN. In conclusion, genetic variant rs10823108 in SIRT1 and variant rs17446614 in FoxO1 may contribute to the risk of DN in T2DM patients.Entities:
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Year: 2017 PMID: 28860538 PMCID: PMC5579017 DOI: 10.1038/s41598-017-10612-7
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Demographic and clinical characteristics of study samples.
| Characteristics | Case (n = 653) | Control (n = 413) | P | OR | |
|---|---|---|---|---|---|
|
| |||||
| Gender | male | 413(63.25%) | 255(61.74%) | 1 | |
| female | 240(36.75%) | 158(38.26%) | 0.62 | 0.94(0.73, 1.21) | |
| Age (years) | 62.46 ± 11.04 | 58.35 ± 12.07 | < 0.01 | ||
|
| |||||
| Duration of diabetes (years) | 11.54 ± 7.47 | 14.29 ± 4.95 | < 0.01 | ||
| BMI (kg/m2) | 26.19 ± 2.55 | 25.25 ± 2.74 | < 0.01 | ||
| HbA1C (%) | 8.88 ± 2.23 | 8.54 ± 1.74 | < 0.01 | ||
|
| |||||
| Smoking | no | 483(73.97%) | 330(79.90%) | 1 | |
| yes | 170(26.03%) | 83(20.10%) | 0.03 | 1.40(1.04, 1.88) | |
| Drinking | no | 553(84.69%) | 361(87.41%) | ||
| yes | 100(15.31%) | 52(12.59%) | 0.22 | 1.26(0.88, 1.80) | |
|
| |||||
| Total cholesterol (mmol/L) | 4.40 ± 1.39 | 4.23 ± 1.09 | 0.03 | ||
| Triglycerides (mmol/L) | 1.87 ± 1.40 | 1.80 ± 1.80 | 0.47 | ||
| HDL-C (mmol/L) | 1.06 ± 0.33 | 1.13 ± 0.35 | < 0.01 | ||
| LDL-C (mmol/L) | 2.65 ± 1.00 | 2.55 ± 0.87 | 0.11 | ||
|
| |||||
| Hypertension | no | 231(35.38%) | 213(51.57%) | 1 | |
| yes | 422(64.62%) | 200(48.43%) | < 0.01 | 1.95(1.51, 2.50) | |
| DM Family history | no | 414(63.40%) | 259(62.71%) | 1 | |
| yes | 239(36.60%) | 154(37.29%) | 0.82 | 0.97(0.75, 1.25) | |
Genotype among cases and controls and their association withT2DN risk.
| SNP | Case(%) | Control(%) | Pa | OR(95%CI)b | Pb | OR(95%CI)c | Pc |
|---|---|---|---|---|---|---|---|
| rs3818292 | |||||||
| AA | 360(55.13) | 226(54.72) | 1 | 1 | |||
| AG | 242(37.06) | 146(35.35) | 1.04(0.80, 1.36) | 0.770 | 1.01(0.76, 1.35) | 0.940 | |
| GG | 51(7.81) | 41(9.93) | 0.26 | 0.78(0.50, 1.22) | 0.270 | 0.69(0.43, 1.11) | 0.120 |
| AG + GG | 293(44.87) | 187(45.28) | 0.98(0.77, 1.26) | 0.900 | 0.94(0.72, 1.23) | 0.650 | |
| AA + AG | 602(92.29) | 372(90.07) | 1 | 1 | |||
| GG | 51(7.81) | 41(9.93) | 0.77(0.50, 1.18) | 0.70(0.44, 1.11) | 0.120 | ||
| A | 962(73.66) | 598(72.40) | 1 | ||||
| G | 344(26.34) | 228(27.60) | 0.94(0.77, 1.14) | 0.520 | |||
| rs4746720 | |||||||
| TT | 191(29.25) | 121(29.30) | 1 | 1 | |||
| CT | 331(50.69) | 210(50.85) | 0.99(0.75, 1.33) | 0.990 | 0.90(0.66, 1.23) | 0.500 | |
| CC | 131(20.06) | 82(19.85) | 0.60 | 1.01(0.71, 1.45) | 0.950 | 1.01(0.69, 1.46) | 0.990 |
| CT + CC | 462(70.75) | 292(70.70) | 0.98(0.77, 1.26) | 0.910 | 0.92(0.69, 1.23) | 0.990 | |
| TT + CT | 522(79.94) | 331(80.15) | 1 | 1 | |||
| CC | 131(20.06) | 82(19.85) | 1.01(0.75, 1.38) | 0.940 | 1.01(0.72, 1.40) | 0.970 | |
| T | 713(54.59) | 452(54.72) | 1 | ||||
| C | 593(45.41) | 374(45.28) | 1.00(0.84, 1.20) | 0.950 | |||
| rs10823108 | |||||||
| GG | 353(54.06) | 224(54.23) | 1 | 1 | |||
| GA | 261(39.97) | 148(35.84) | 1.12(0.86, 1.45) | 0.400 | 1.07(0.81, 1.43) | 0.620 | |
| AA | 39(5.97) | 41(9.93) | 0.36 | 0.60(0.38, 0.97) | 0.040 | 0.57(0.34, 0.94) | 0.030 |
| GA + AA | 300(45.94) | 189(45.77) | 1.01(0.79, 1.29) | 0.950 | 0.97(0.74, 1.27) | 0.820 | |
| GG + AG | 614(94.03) | 372(90.07) | 1 | 1 | |||
| AA | 39(5.97) | 41(9.93) | 0.58(0.37, 0.91) | 0.020 | 0.56(0.34, 0.92) | 0.020 | |
| G | 967(74.04) | 596(72.15) | 1 | ||||
| A | 339(25.96) | 230(27.85) | 0.91(0.75, 1.11) | 0.340 | |||
| rs17446614 | |||||||
| GG | 392(60.03) | 304(73.61) | 1 | 1 | |||
| GA | 219(33.54) | 95(23.00) | 1.77(1.33, 2.35) | < 0.001 | 1.54(1.14, 2.13) | < 0.001 | |
| AA | 42(6.43) | 14(3.39) | 0.07 | 2.32(1.25, 4.34) | 0.02 | 2.34(1.77, 4.13) | < 0.001 |
| GA + AA | 261(39.97) | 109(26.39) | 1.86(1.42, 2.43) | < 0.001 | 1.65(1.19, 2.26) | < 0.001 | |
| GG + AG | 611(93.57) | 399(96.61) | 1 | 1 | |||
| AA | 42(6.43) | 14(3.39) | 1.96(1.06, 3.63) | 0.03 | 2.07(1.38, 4.14) | < 0.001 | |
| G | 1003(76.80) | 703(85.11) | 1 | ||||
| A | 303(23.20) | 123(14.89) | 1.73(1.37, 2.18) | < 0.001 | |||
| rs2721068 | |||||||
| TT | 77(11.79) | 40(9.68) | 1 | 1 | |||
| CT | 296(45.33) | 192(46.49) | 0.80(0.53, 1.22) | 0.300 | 0.64(0.40, 1.02) | 0.060 | |
| CC | 280(42.88) | 181(43.83) | 0.29 | 0.81(0.53, 1.23) | 0.310 | 0.73(0.46, 1.15) | 0.180 |
| CT + CC | 576(88.21) | 373(90.32) | 0.80(0.54, 1.20) | 0.280 | 0.68(0.44, 1.05) | 0.080 | |
| TT + CT | 373(57.12) | 232(56.17) | 1 | 1 | |||
| TT | 77(11.79) | 40(9.68) | 0.97(0.75, 1.23) | 0.760 | 0.95(0.73, 1.24) | 0.690 | |
| T | 450(34.46) | 272(32.93) | 1 | ||||
| C | 856(65.54) | 554(67.07) | 0.93(0.78, 1.12) | 0.470 | |||
aP value of Hardy–Weinberg equilibrium in Controls.
bChi square test for genotype distributions between cases and controls.
cData were calculated by logistic regression analysis with adjusted for age, gender,duration of diabetes, BMI, HbA1C, total cholesterol, triglycerides, HDL-C, LDL-C,history of Hypertension, DM family history, smoking and drinking.
Stratification analysis of the five SNPs polymorphisms and DN susceptibility.
| Variables | rs3818292 AG + GG /AA | rs4746720 TC + CC /TT | rs10823108 GA + AA/GG | rs17446614 GA + AA/GG | rs2721068 TC + CC /TT | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| OR (95%CI)a | Pb | OR (95%CI)a | Pb | OR (95%CI)a | Pb | OR (95%CI)a | Pb | OR (95%CI)a | Pb | |
|
| ||||||||||
| male | 0.76(0.54, 1.06) | 0.11 | 1.07(0.73, 1.55) | 0.73 | 0.88(0.62, 1.21) | 0.44 | 2.32(1.58, 3.41) | < 0.0001 | 0.47(0.25, 0.87) | 0.02 |
| female | 1.32(0.84, 2.08) | 0.23 | 0.77(0.47, 1.25) | 0.29 | 1.06(0.67, 1.68) | 0.79 | 2.67(1.62, 4.40) | < 0.0001 | 0.96(0.51, 1.82) | 0.90 |
|
| ||||||||||
| ≤60 | 0.79(0.53, 1.16) | 0.23 | 1.06(0.69, 1.64) | 0.78 | 0.91(0.62, 1.34) | 0.63 | 2.65(1.68, 4.18) | < 0.0001 | 0.35(0.17, 0.71) | 0.00 |
| >60 | 1.09(0.75, 1.57) | 0.66 | 0.86(0.58, 1.30) | 0.48 | 1.03(0.71, 1.49) | 0.89 | 2.02(1.34, 3.02) | 0.0007 | 1.03(0.57, 1.86) | 0.92 |
|
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| ≤10 | 1.01(0.61, 1.68) | 0.97 | 0.95(0.57, 1.59) | 0.85 | 1.00(0.67, 1.57) | 0.99 | 1.03(0.63, 1.67) | 0.53 | 0.63(0.29, 1.37) | 0.25 |
| >10 | 0.89(0.64, 1.26) | 0.52 | 0.95(0.66, 1.37) | 0.79 | 0.94(0.67, 1.32) | 0.73 | 1.27(0.55, 2.32) | 0.49 | 0.72(0.42, 1.24) | 0.23 |
|
| ||||||||||
| <24 | 1.23(0.67, 2.28) | 0.50 | 0.79(0.43, 1.43) | 0.43 | 0.66(0.37, 1.16) | 0.15 | 4.60(2.44, 8.66) | <0.0001 | 1.93(0.78, 4.78) | 0.15 |
| ≥ 24 | 0.95(0.70, 1.29) | 0.75 | 0.97(0.70, 1.36) | 0.89 | 1.06(0.78, 1.44) | 0.70 | 1.89(1.35, 2.65) | 0.0002 | 0.46(0.26, 0.79) | 0.01 |
|
| ||||||||||
| ≤8 | 1.21(0.83, 1.76) | 0.33 | 0.93(0.62, 1.41) | 0.73 | 1.13(0.78, 1.65) | 0.52 | 1.06(0.58, 1.39) | 0.68 | 0.62(0.34, 1.15) | 0.13 |
| >8 | 0.75(0.51, 1.10) | 0.14 | 0.88(0.58, 1.33) | 0.54 | 0.87(0.60, 1.27) | 0.47 | 1.48(0.99, 2.23) | 0.0600 | 0.77(0, 42, 1.41) | 0.40 |
|
| ||||||||||
| ≤1 | 1.17(0.78, 1.74) | 0.44 | 0.66(0.41, 1.05) | 0.08 | 1.13(0.76, 1.68) | 0.55 | 1.07(0.34, 1.78) | 0.53 | 0.51(0.25, 1.05) | 0.07 |
| >1 | 0.83(0.57, 1.20) | 0.31 | 1.21(0.82, 1.79) | 0.36 | 0.88(0.61, 1.27) | 0.48 | 1.09(0.41, 2.11) | 0.78 | 0.81(0.46, 1.46) | 0.49 |
|
| ||||||||||
| ≤3.5 | 0.93(0.69, 1.25) | 0.62 | 0.93(0.67, 1.28) | 0.64 | 0.95(0.71, 1.27) | 0.71 | 2.21(1.60, 3.06) | <0.0001 | 0.61(0.38, 0.98) | 0.04 |
| >3.5 | 0.93(0.40, 2.17) | 0.86 | 0.87(0.35, 2.13) | 0.75 | 0.68(0.29, 1.59) | 0.38 | 1.45(0.96, 2.21) | 0.12 | 1.80(0.54, 6.01) | 0.34 |
|
| ||||||||||
| ≤5 | 0.84(0.62, 1.15) | 0.28 | 1.03(0.72, 1.45) | 0.88 | 0.81(0.60, 1.11) | 0.20 | 2.29(1.62, 3.22) | <0.0001 | 0.70(0.41, 1.17) | 0.17 |
| >5 | 2.11(1.06, 4.21) | 0.03 | 0.78(0.38, 1.60) | 0.49 | 1.92(0.98, 3.79) | 0.06 | 2.57(1.16, 5.70) | 0.0200 | 0.65(0.25, 1.78) | 0.40 |
|
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| ≤1.65 | 0.99(0.69, 1.41) | 0.94 | 1.00(0.68, 1.48) | 0.98 | 0.94(0.66, 1.35) | 0.75 | 1.09(0.39, 2.13) | 0.76 | 0.67(0.38, 1.18) | 0.17 |
| >1.65 | 1.00(0.65, 1.54) | 0.99 | 0.76(0.47, 1.22) | 0.25 | 1.02(0.67, 1.57) | 0.93 | 1.18(0.73, 2.55) | 0.89 | 0.82(0.39, 1.69) | 0.59 |
|
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| No | 0.94(0.63, 1.41) | 0.76 | 0.97(0.63, 1.51) | 0.90 | 1.01(0.67, 1.52) | 0.95 | 2.68(1.74, 4.14) | <0.0001 | 0.89(0.49, 1.63) | 0.71 |
| Yes | 1.00(0.70, 1.42) | 0.98 | 0.88(0.60, 1.31) | 0.53 | 0.95(0.67, 1.35) | 0.78 | 2.03(1.35, 3.05) | 0.0007 | 0.53(0.28, 1.02) | 0.06 |
|
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| No | 0.97(0.69, 1.36) | 0.86 | 0.93(0.64, 1.35) | 0.69 | 1.10(0.78, 1.55) | 0.58 | 2.27(1.55, 3.34) | <0.0001 | 0.50(0.28, 0.91) | 0.02 |
| Yes | 0.91(0.60, 1.40) | 0.68 | 0.92(0.57, 1.47) | 0.72 | 0.83(0.54, 1.27) | 0.38 | 2.33(1.45, 3.76) | 0.0005 | 1.12(0.59, 2.14) | 0.74 |
|
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| No | 0.92(0.69, 1.23) | 0.58 | 0.85(0.63, 1.18) | 0.35 | 0.96(0.72, 1.28) | 0.76 | 1.52(0.82, 2.49) | 0.56 | 0.85(0.58, 1.33) | 0.47 |
| Yes | 1.08(0.54, 2.17) | 0.82 | 2.02(0.87, 4.67) | 0.10 | 1.12(0.56, 2.25) | 0.75 | 1.14(0.54, 2.40) | 0.7300 | 0.75(0.85, 3.59) | 0.13 |
|
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| No | 0.96(0.70, 1.31) | 0.79 | 0.84(0.60, 1.17) | 0.30 | 0.95(0.70, 1.30) | 0.74 | 2.35(1.66, 3.31) | <0.0001 | 0.88(0.55, 1.43) | 0.61 |
| Yes | 0.93(0.63, 1.61) | 0.79 | 1.12(0.61, 2.06) | 0.71 | 1.05(0.60, 1.83) | 0.87 | 2.06(1.10, 3.85) | 0.0200 | 0.14(0.03, 0.64) | 0.01 |
aAdjusted for age, gender,duration of diabetes, BMI, HbA1C, total cholesterol, triglycerides, HDL-C, LDL-C,history of Hypertension, DM family history, smoking and drinking (the stratified factor in each stratum excluded).
b P value for heterogeneity test.
Haplotype Analysis of five Polymorphism Sites.
| Gene | Haplotype | Cases (%) | Controls (%) | χ2 | P | OR (95%CI) |
|---|---|---|---|---|---|---|
| SIRT1a | A C A | 11.89(9.0) | 10.70(1.3) | 0.72 | 0.40 | 0.70(0.31, 1.61) |
| A C G | 562.12(43.0) | 343.59(41.6) | 0.43 | 0.51 | 1.06(0.89, 1.27) | |
| A T A | 29.55(2.3) | 26.76(3.2) | 1.88 | 0.17 | 0.69(0.41, 1.18) | |
| A T G | 358.44(27.4) | 216.95(26.3) | 0.36 | 0.55 | 1.06(0.87, 1.29) | |
| G C A | 4.44(0.3) | 5.31(0.6) | 1.02 | 0.31 | 0.53(0.15, 1.87) | |
| G C G | 14.55(1.1) | 14.41(1.7) | 1.50 | 0.22 | 0.64(0.31, 1.32) | |
| G T A | 293.12(22.4) | 187.23(22.7) | 0.01 | 0.90 | 0.99(0.80, 1.22) | |
| G T G | 31.89(2.4) | 21.05(2.5) | 0.02 | 0.88 | 0.96(0.55, 1.67) | |
| FOXO1b | A C | 209.39(16.0) | 93.44(11.3) | 9.25 | 0.00 | 1.50(1.15, 1.94) |
| A T | 108.61(8.3) | 11.56(1.4) | 45.52 | 0.00 | 1.79(1.06, 2.80) | |
| G C | 646.61(49.5) | 460.56(55.8) | 7.91 | 0.00 | 0.78(0.65,0.93) | |
| G T | 341.39 (26.1) | 260.44(31.5) | 7.26 | 0.01 | 0.77(0.63,0.93) |
aSNPs sequence: rs3818292,rs4746720 and rs10823108.
bSNPs sequence: rs17446614 and rs2721068.
Combined Effect of the five SNPs on DN.
| Combined SNPs | Cases (%) | Controls (%) | χ2 | P | OR (95%CI) |
|---|---|---|---|---|---|
| 0–2 | 123(18.84) | 76(18.41) | 1 | ||
| 3–4 | 340(50.07) | 232(56.17) | 0.35 | 0.56 | 0.91(0.65, 1.26) |
| 5–6 | 170(26.03) | 96(23.24) | 0.22 | 0.64 | 1.09(0.75, 1.60) |
| ≥7 | 20(3.06) | 9(2.18) | 0.55 | 0.46 | 1.37(0.60, 3.17) |
| 0.81a | 0.37a | ||||
| Total | 653 | 413 |
aTrend Chi-square and P values.
Interaction results between the five SNPs and risk factors by MDR.
| Model | Testing balacc | CV consistency | χ2 | OR(95%CI) |
|
|---|---|---|---|---|---|
| Duration of diabetes | 0.6057 | 10/10 | 4.66 | 1.94(1.09, 3.13) | 0.03 |
| BMI, Duration of diabetes | 0.5591 | 5/10 | 6.74 | 2.24 (1.56, 3.63) | 0.01 |
| rs1746614, BMI, Duration of diabetes | 0.6091 | 6/10 | 5.01 | 2.63(1.23, 4.31) | 0.02 |
Detail of PCR Primers and restriction endonucleases primers.
| SNP | Location | Chr:position | MAFa | Endonuclease | Primers |
|---|---|---|---|---|---|
| rs3818292 A > G | SIRT1,Intron | Chr10:67907144 | G = 0.1272 | VspI | F: GACAATTCCAGCCATCTCT |
| R: CTCACGCCTGTAATCCTAG | |||||
| rs4746720 T > C | SIRT1,Intron | Chr10:67917073 | C = 0.1156 | Hpy1881 | F: AGGGAACAGCTAATCTAGACCA |
| R: AAAGTAAAGACAACCGAGTGCT | |||||
| rs10823108 G > A | SIRT1,Intron | Chr10:67900736 | A = 0.1272 | Hpy1881 | F: TCTCAGCCTCCCAAGTAG |
| R: AGTAGTAACCAGCAGTCATC | |||||
| rs17446614 G > A | FOXO1,Intron | Chr13:40565740 | A = 0.1767 | CviJI | F: CACAGCACCAACACCATAG |
| R: GACAGCCTCACCTTAGTATT | |||||
| rs2721068 T > C | FOXO1,Intron | Chr13:40565575 | T = 0.4856 | TspRI | F: AGAGCCACTTAATAGGATGAC |
| R: ACCTTTGTCTGTCTTCTTGTACAC |
abased on the Chinese Han population data of HapMap.