Literature DB >> 28856771

Enhanced Stability of DNA Nanostructures by Incorporation of Unnatural Base Pairs.

Qing Liu1,2, Guocheng Liu3, Ting Wang1, Jing Fu3,2, Rujiao Li4, Linlin Song1,2, Zhen-Gang Wang1, Baoquan Ding1,2, Fei Chen3,2.   

Abstract

Self-assembled DNA nanostructures hold great promise in the fields of nanofabrication, biosensing and nanomedicine. However, the inherent low stability of the DNA double helices, formed by weak interactions, largely hinders the assembly and functions of DNA nanostructures. In this study, we redesigned and constructed a six-arm DNA junction by incorporation of the unnatural base pairs 5-Me-isoC/isoG and A/2-thioT into the double helices. They not only retained the structural integrity of the DNA nanostructure, but also showed enhanced thermal stability and resistance to T7 Exonuclease digestion. This research may expand the applications of DNA nanostructures in nanofabrication and biomedical fields, and furthermore, the genetic alphabet expansion with unnatural base pairs may enable us to construct more complicated and diversified self-assembled DNA nanostructures.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA nanostructures; enzymatic digestion; self-assembly; thermal stability; unnatural base pairs

Mesh:

Substances:

Year:  2017        PMID: 28856771     DOI: 10.1002/cphc.201700809

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  7 in total

1.  Hybrid DNA/RNA nanostructures with 2'-5' linkages.

Authors:  Arun Richard Chandrasekaran; Johnsi Mathivanan; Parisa Ebrahimi; Javier Vilcapoma; Alan A Chen; Ken Halvorsen; Jia Sheng
Journal:  Nanoscale       Date:  2020-11-05       Impact factor: 7.790

2.  Nuclease Degradation Analysis of DNA Nanostructures Using Gel Electrophoresis.

Authors:  Arun Richard Chandrasekaran; Ken Halvorsen
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2020-09

3.  Exceptional Nuclease Resistance of Paranemic Crossover (PX) DNA and Crossover-Dependent Biostability of DNA Motifs.

Authors:  Arun Richard Chandrasekaran; Javier Vilcapoma; Paromita Dey; Siu Wah Wong-Deyrup; Bijan K Dey; Ken Halvorsen
Journal:  J Am Chem Soc       Date:  2020-03-25       Impact factor: 15.419

Review 4.  Nuclease resistance of DNA nanostructures.

Authors:  Arun Richard Chandrasekaran
Journal:  Nat Rev Chem       Date:  2021-02-10       Impact factor: 34.035

5.  Selective and stable base pairing by alkynylated nucleosides featuring a spatially-separated recognition interface.

Authors:  Hidenori Okamura; Giang Hoang Trinh; Zhuoxin Dong; Yoshiaki Masaki; Kohji Seio; Fumi Nagatsugi
Journal:  Nucleic Acids Res       Date:  2022-04-08       Impact factor: 16.971

6.  7,8-Dihydro-8-oxo-1,N6-ethenoadenine: an exclusively Hoogsteen-paired thymine mimic in DNA that induces A→T transversions in Escherichia coli.

Authors:  Andrey V Aralov; Nina Gubina; Cristina Cabrero; Vladimir B Tsvetkov; Anton V Turaev; Bogdan I Fedeles; Robert G Croy; Ekaterina A Isaakova; Denis Melnik; Svetlana Dukova; Dmitriy Y Ryazantsev; Alexei A Khrulev; Anna M Varizhuk; Carlos González; Timofei S Zatsepin; John M Essigmann
Journal:  Nucleic Acids Res       Date:  2022-04-08       Impact factor: 16.971

7.  Development of albumin macroinitiator for polymers to use in DNA origami coating

Authors:  Aykut Bilir; Ezgi Emül; Necdet Sağlam
Journal:  Turk J Med Sci       Date:  2020-08-26       Impact factor: 0.973

  7 in total

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