Literature DB >> 28856655

Rapid Gene Isolation Using MutChromSeq.

Burkhard Steuernagel1, Jan Vrána2, Miroslava Karafiátová2, Brande B H Wulff1, Jaroslav Doležel3.   

Abstract

MutChromSeq is an approach for isolation of genes and DNA sequences controlling gene expression in plants with complex and polyploid genomes. It involves a lossless complexity reduction by flow cytometric chromosome sorting and shotgun sequencing DNA from isolated chromosomes. Comparison of sequences from wild-type parental chromosome with chromosomes from multiple independently derived mutants identifies causative mutations in a single candidate gene or a noncoding sequence. MutChromSeq does not rely on recombination-based genetic mapping and does not exclude any DNA sequence from being targeted.

Keywords:  Chromosome isolation; FISHIS; Flow cytometry and chromosome sorting; Gene cloning; Mutational genomics

Mesh:

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Year:  2017        PMID: 28856655     DOI: 10.1007/978-1-4939-7249-4_20

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  3 in total

Review 1.  Breeding oat for resistance to the crown rust pathogen Puccinia coronata f. sp. avenae: achievements and prospects.

Authors:  R F Park; W H P Boshoff; A L Cabral; J Chong; J A Martinelli; M S McMullen; J W Mitchell Fetch; E Paczos-Grzęda; E Prats; J Roake; S Sowa; L Ziems; D Singh
Journal:  Theor Appl Genet       Date:  2022-06-04       Impact factor: 5.699

2.  A catalogue of resistance gene homologs and a chromosome-scale reference sequence support resistance gene mapping in winter wheat.

Authors:  Sandip M Kale; Albert W Schulthess; Sudharsan Padmarasu; Philipp H G Boeven; Johannes Schacht; Axel Himmelbach; Burkhard Steuernagel; Brande B H Wulff; Jochen C Reif; Nils Stein; Martin Mascher
Journal:  Plant Biotechnol J       Date:  2022-05-30       Impact factor: 13.263

Review 3.  Fine mapping and gene cloning in the post-NGS era: advances and prospects.

Authors:  Deepa Jaganathan; Abhishek Bohra; Mahendar Thudi; Rajeev K Varshney
Journal:  Theor Appl Genet       Date:  2020-02-10       Impact factor: 5.699

  3 in total

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