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Literature DB >> 28854180

Reply: Uncertainties in tumor allele frequencies limit power to infer evolutionary pressures.

Marc J Williams^1,2,3, Benjamin Werner⁴, Chris P Barnes^2,5, Trevor A Graham¹, Andrea Sottoriva⁴.

Abstract

Entities: Disease

Mesh：

Year: 2017 PMID： 28854180 DOI： 10.1038/ng.3877

Source DB: PubMed Journal: Nat Genet ISSN： 1061-4036 Impact factor: 38.330

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7 in total

1. Genetic drift in an infinite population. The pseudohitchhiking model.

Authors: J H Gillespie
Journal: Genetics Date: 2000-06 Impact factor: 4.562

Review 2. Coalescents and genealogical structure under neutrality.

Authors: P Donnelly; S Tavaré
Journal: Annu Rev Genet Date: 1995 Impact factor: 16.830

3. Only three driver gene mutations are required for the development of lung and colorectal cancers.

Authors: Cristian Tomasetti; Luigi Marchionni; Martin A Nowak; Giovanni Parmigiani; Bert Vogelstein
Journal: Proc Natl Acad Sci U S A Date: 2014-12-22 Impact factor: 11.205

Review 4. Clonal evolution in cancer.

Authors: Mel Greaves; Carlo C Maley
Journal: Nature Date: 2012-01-18 Impact factor: 49.962

Review 5. The Ecology and Evolution of Cancer: The Ultra-Microevolutionary Process.

Authors: Chung-I Wu; Hurng-Yi Wang; Shaoping Ling; Xuemei Lu
Journal: Annu Rev Genet Date: 2016-09-28 Impact factor: 16.830

6. Identification of neutral tumor evolution across cancer types.

Authors: Marc J Williams; Benjamin Werner; Chris P Barnes; Trevor A Graham; Andrea Sottoriva
Journal: Nat Genet Date: 2016-01-18 Impact factor: 38.330

7. Whole-genome sequencing and comprehensive molecular profiling identify new driver mutations in gastric cancer.

Authors: Kai Wang; Siu Tsan Yuen; Jiangchun Xu; Siu Po Lee; Helen H N Yan; Stephanie T Shi; Hoi Cheong Siu; Shibing Deng; Kent Man Chu; Simon Law; Kok Hoe Chan; Annie S Y Chan; Wai Yin Tsui; Siu Lun Ho; Anthony K W Chan; Jonathan L K Man; Valentina Foglizzo; Man Kin Ng; April S Chan; Yick Pang Ching; Grace H W Cheng; Tao Xie; Julio Fernandez; Vivian S W Li; Hans Clevers; Paul A Rejto; Mao Mao; Suet Yi Leung
Journal: Nat Genet Date: 2014-05-11 Impact factor: 38.330

7 in total

4 in total

Reply: Uncertainties in tumor allele frequencies limit power to infer evolutionary pressures.

1. Genetic drift in an infinite population. The pseudohitchhiking model.

Review 2. Coalescents and genealogical structure under neutrality.

3. Only three driver gene mutations are required for the development of lung and colorectal cancers.

Review 4. Clonal evolution in cancer.

Review 5. The Ecology and Evolution of Cancer: The Ultra-Microevolutionary Process.

6. Identification of neutral tumor evolution across cancer types.

7. Whole-genome sequencing and comprehensive molecular profiling identify new driver mutations in gastric cancer.

1. Estimating growth patterns and driver effects in tumor evolution from individual samples.

Review 2. Population genetics of clonally transmissible cancers.

Review 3. A practical guide to cancer subclonal reconstruction from DNA sequencing.

4. Reconstructing the molecular life history of gliomas.