Literature DB >> 28851271

Erratum to: Sequence differences in the seed dormancy gene Qsd1 among various wheat genomes.

Kazumitsu Onishi¹, Miki Yamane², Nami Yamaji², Mayumi Tokui¹, Hiroyuki Kanamori³, Jianzhong Wu³, Takao Komatsuda³, Kazuhiro Sato⁴.

Abstract

Entities: Chemical Species

Year: 2017 PMID： 28851271 PMCID： PMC5576352 DOI： 10.1186/s12864-017-4046-2

Source DB: PubMed Journal: BMC Genomics ISSN： 1471-2164 Impact factor: 3.969

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Erratum

After the publication of this article [1] the authors noted that Fig. 2 was incorrect and a number of species abbreviations were not in their intended positions, such as At2 and Bd2.

Fig. 2

Multiple alignment of QSD1 amino acid sequences (Hv1: Haruna Nijo). The listed sequences are from accessions showing similarity to QSD1 (E-value < E-145) by Blastp analysis of NCBI nr. Species and homologs (with accession numbers) are as follows: Hordeum vulgare: Hv1 (BAK04026.1), Hv2 (BAK07780.1), Hv3 (P52894.1), Hv4 (BAK05632.1), Hv5part (BAJ90574.1); Triticum aestivum: TaA (AK333743.1), TaB (LC209618), TaD (LC209619), Ta2part (CAE54279.1); T. monococcum: Tm (LC209623); T. boeoticum: Tb (LC209622); Aegilops tauschii: Aet1 (EMT25616.1), Aet2 (EMT05433.1), Aet3 (EMT23015.1), Aet4 (EMT08497.1), Aet5EMT29455.1); Oryza sativa: Os1 (NP_001063248.1), Os2 (NP_001064504.1) Os3 (NP_001064505.2), Os4 (NP_001060284.1), Os5 (NP_001058716.1); Sorghum bicolor: Sb1 (XP_002463187.1), Sb2 (XP_002467302.1); Brachypodium distachyon: Bd1 (XP_003578159.1), Bd2 (XP_010235387.1), Bd3 (XP_003557680.1); Arabidopsis thaliana: At1 (NP_173173.3), At2 (AAK68842.1); Medicago truncatula: Mt1 (XP_003627448.1), Mt2 (XP_003613139.1). Scale bar indicates Poisson Correction distance. Numerals show test values for 1000 bootstrap replications

A correct version of Fig. 2 is included with this Erratum. The original article has been corrected. Multiple alignment of QSD1 amino acid sequences (Hv1: Haruna Nijo). The listed sequences are from accessions showing similarity to QSD1 (E-value < E-145) by Blastp analysis of NCBI nr. Species and homologs (with accession numbers) are as follows: Hordeum vulgare: Hv1 (BAK04026.1), Hv2 (BAK07780.1), Hv3 (P52894.1), Hv4 (BAK05632.1), Hv5part (BAJ90574.1); Triticum aestivum: TaA (AK333743.1), TaB (LC209618), TaD (LC209619), Ta2part (CAE54279.1); T. monococcum: Tm (LC209623); T. boeoticum: Tb (LC209622); Aegilops tauschii: Aet1 (EMT25616.1), Aet2 (EMT05433.1), Aet3 (EMT23015.1), Aet4 (EMT08497.1), Aet5EMT29455.1); Oryza sativa: Os1 (NP_001063248.1), Os2 (NP_001064504.1) Os3 (NP_001064505.2), Os4 (NP_001060284.1), Os5 (NP_001058716.1); Sorghum bicolor: Sb1 (XP_002463187.1), Sb2 (XP_002467302.1); Brachypodium distachyon: Bd1 (XP_003578159.1), Bd2 (XP_010235387.1), Bd3 (XP_003557680.1); Arabidopsis thaliana: At1 (NP_173173.3), At2 (AAK68842.1); Medicago truncatula: Mt1 (XP_003627448.1), Mt2 (XP_003613139.1). Scale bar indicates Poisson Correction distance. Numerals show test values for 1000 bootstrap replications

1 in total

1. Sequence differences in the seed dormancy gene Qsd1 among various wheat genomes.

Authors: Kazumitsu Onishi; Miki Yamane; Nami Yamaji; Mayumi Tokui; Hiroyuki Kanamori; Jianzhong Wu; Takao Komatsuda; Kazuhiro Sato
Journal: BMC Genomics Date: 2017-06-29 Impact factor: 3.969

1 in total