Literature DB >> 28850185

Multiparameter imaging of calcium and abscisic acid and high-resolution quantitative calcium measurements using R-GECO1-mTurquoise in Arabidopsis.

Rainer Waadt1, Melanie Krebs1, Jörg Kudla2, Karin Schumacher1.   

Abstract

Calcium signals occur in specific spatio-temporal patterns in response to various stimuli and are coordinated with, for example, hormonal signals, for physiological and developmental adaptations. Quantification of calcium together with other signalling molecules is required for correlative analyses and to decipher downstream calcium-decoding mechanisms. Simultaneous in vivo imaging of calcium and abscisic acid has been performed here to investigate the interdependence of the respective signalling processes in Arabidopsis thaliana roots. Advanced ratiometric genetically encoded calcium indicators have been generated and in vivo calcium calibration protocols were established to determine absolute calcium concentration changes in response to auxin and ATP. In roots, abscisic acid induced long-term basal calcium concentration increases, while auxin triggered rapid signals in the elongation zone. The advanced ratiometric calcium indicator R-GECO1-mTurquoise exhibited an increased calcium signal resolution compared to commonly used Förster resonance energy transfer-based indicators. Quantitative calcium measurements in Arabidopsis root tips using R-GECO1-mTurquoise revealed detailed maps of absolute calcium concentration changes in response to auxin and ATP. Calcium calibration protocols using R-GECO1-mTurquoise enabled high-resolution quantitative imaging of resting cytosolic calcium concentrations and their dynamic changes that revealed distinct hormonal and ATP responses in roots.
© 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Entities:  

Keywords:  zzm321990Arabidopsis thalianazzm321990; R-GECO1-mTurquoise; abscisic acid; auxin; calcium signalling; calibration; genetically encoded indicators; quantitative calcium imaging

Mesh:

Substances:

Year:  2017        PMID: 28850185     DOI: 10.1111/nph.14706

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  32 in total

1.  Dual-Reporting Transcriptionally Linked Genetically Encoded Fluorescent Indicators Resolve the Spatiotemporal Coordination of Cytosolic Abscisic Acid and Second Messenger Dynamics in Arabidopsis.

Authors:  Rainer Waadt; Philipp Köster; Zaida Andrés; Christian Waadt; Gabriele Bradamante; Konstantinos Lampou; Jörg Kudla; Karin Schumacher
Journal:  Plant Cell       Date:  2020-05-29       Impact factor: 11.277

2.  Transcriptomic perspective on extracellular ATP signaling: a few curious trifles.

Authors:  Jeremy B Jewell; Kiwamu Tanaka
Journal:  Plant Signal Behav       Date:  2019-08-26

3.  A high throughput machine-learning driven analysis of Ca2+ spatio-temporal maps.

Authors:  Wesley A Leigh; Guillermo Del Valle; Sharif Amit Kamran; Bernard T Drumm; Alireza Tavakkoli; Kenton M Sanders; Salah A Baker
Journal:  Cell Calcium       Date:  2020-07-28       Impact factor: 6.817

Review 4.  Mitochondrial Energy Signaling and Its Role in the Low-Oxygen Stress Response of Plants.

Authors:  Stephan Wagner; Olivier Van Aken; Marlene Elsässer; Markus Schwarzländer
Journal:  Plant Physiol       Date:  2018-01-03       Impact factor: 8.340

5.  Phosphate Starvation Alters Abiotic-Stress-Induced Cytosolic Free Calcium Increases in Roots.

Authors:  Elsa Matthus; Katie A Wilkins; Stéphanie M Swarbreck; Nicholas H Doddrell; Fabrizio G Doccula; Alex Costa; Julia M Davies
Journal:  Plant Physiol       Date:  2019-01-29       Impact factor: 8.340

6.  Ca2+-dependent phosphorylation of NRAMP1 by CPK21 and CPK23 facilitates manganese uptake and homeostasis in Arabidopsis.

Authors:  Dali Fu; Zhenqian Zhang; Lukas Wallrad; Zhangqing Wang; Stefanie Höller; ChuanFeng Ju; Ina Schmitz-Thom; Panpan Huang; Lei Wang; Edgar Peiter; Jörg Kudla; Cun Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-26       Impact factor: 12.779

7.  New open-source software for subcellular segmentation and analysis of spatiotemporal fluorescence signals using deep learning.

Authors:  Sharif Amit Kamran; Khondker Fariha Hossain; Hussein Moghnieh; Sarah Riar; Allison Bartlett; Alireza Tavakkoli; Kenton M Sanders; Salah A Baker
Journal:  iScience       Date:  2022-04-21

8.  Cellular Ca2+ Signals Generate Defined pH Signatures in Plants.

Authors:  Smrutisanjita Behera; Xu Zhaolong; Laura Luoni; Maria Cristina Bonza; Fabrizio Gandolfo Doccula; Maria Ida De Michelis; Richard J Morris; Markus Schwarzländer; Alex Costa
Journal:  Plant Cell       Date:  2018-10-29       Impact factor: 11.277

Review 9.  Signaling mechanisms in abscisic acid-mediated stomatal closure.

Authors:  Po-Kai Hsu; Guillaume Dubeaux; Yohei Takahashi; Julian I Schroeder
Journal:  Plant J       Date:  2020-12-09       Impact factor: 6.417

Review 10.  Encoding, transmission, decoding, and specificity of calcium signals in plants.

Authors:  Claudia Allan; Richard J Morris; Claudia-Nicole Meisrimler
Journal:  J Exp Bot       Date:  2022-06-02       Impact factor: 7.298

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