Literature DB >> 28848248

Techniques for characterization and eradication of potato cyst nematode: a review.

Aarti Bairwa1, E P Venkatasalam1, R Sudha1, R Umamaheswari1, B P Singh1.   

Abstract

Correct identification of species and pathotypes is must for eradication of potato cyst nematodes (PCN). The identification of PCN species after completing the life cycle is very difficult because it is based on morphological and morphometrical characteristics. Genetically different populations of PCN are morphologically same and differentiated based on the host differential study. Later on these traditional techniques have been replaced by biochemical techniques viz, one and two dimensional gel electrophoresis, capillary gel electrophoresis, isozymes, dot blot hybridization and isoelectric focusing etc. to distinguish both the species. One and two dimensional gel electrophoresis has used to examine inter- and intra-specific differences in proteins of Globodera rostochiensis and G. pallida. Now application of PCR and DNA based characterization techniques like RAPD, AFLP and RFLP are the important tools for differentiating inter- and intra specific variation in PCN and has given opportunities to accurate identification of PCN. For managing the PCN, till now we are following integrated pest management (IPM) strategies, however these strategies are not effective to eradicate the PCN. Therefore to eradicate the PCN we need noval management practices like RNAi (RNA interference) or Gene silencing.

Entities:  

Keywords:  Biochemical techniques; DNA based characterization; Gene silencing; PCN

Year:  2017        PMID: 28848248      PMCID: PMC5555919          DOI: 10.1007/s12639-016-0873-3

Source DB:  PubMed          Journal:  J Parasit Dis        ISSN: 0971-7196


  45 in total

1.  Cloning, expression and functional characterisation of a peroxiredoxin from the potato cyst nematode Globodera rostochiensis.

Authors:  L Robertson; W M Robertson; M Sobczak; J Helder; E Tetaud; M R Ariyanayagam; M A Ferguson; A Fairlamb; J T Jones
Journal:  Mol Biochem Parasitol       Date:  2000-11       Impact factor: 1.759

2.  An efficient cDNA-AFLP-based strategy for the identification of putative pathogenicity factors from the potato cyst nematode Globodera rostochiensis.

Authors:  L Qin; H Overmars; J Helder; H Popeijus; J R van der Voort; W Groenink; P van Koert; A Schots; J Bakker; G Smant
Journal:  Mol Plant Microbe Interact       Date:  2000-08       Impact factor: 4.171

Review 3.  Getting to the roots of parasitism by nematodes.

Authors:  Eric L Davis; Richard S Hussey; Thomas J Baum
Journal:  Trends Parasitol       Date:  2004-03

4.  flp gene disruption in a parasitic nematode reveals motor dysfunction and unusual neuronal sensitivity to RNA interference.

Authors:  Michael J Kimber; Susan McKinney; Steven McMaster; Tim A Day; Colin C Fleming; Aaron G Maule
Journal:  FASEB J       Date:  2007-01-02       Impact factor: 5.191

5.  Structural and functional diversity of CLAVATA3/ESR (CLE)-like genes from the potato cyst nematode Globodera rostochiensis.

Authors:  Shun-Wen Lu; Shiyan Chen; Jianying Wang; Hang Yu; Demosthenis Chronis; Melissa G Mitchum; Xiaohong Wang
Journal:  Mol Plant Microbe Interact       Date:  2009-09       Impact factor: 4.171

6.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

7.  Endogenous cellulases in animals: isolation of beta-1, 4-endoglucanase genes from two species of plant-parasitic cyst nematodes.

Authors:  G Smant; J P Stokkermans; Y Yan; J M de Boer; T J Baum; X Wang; R S Hussey; F J Gommers; B Henrissat; E L Davis; J Helder; A Schots; J Bakker
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-28       Impact factor: 11.205

8.  Determination of relative proportions of Globodera species in mixed populations of potato cyst nematodes using PCR product melting peak analysis.

Authors:  Jayne A Bates; Emily J A Taylor; Paul T Gans; Jane E Thomas
Journal:  Mol Plant Pathol       Date:  2002-05-01       Impact factor: 5.663

Review 9.  Parasitism proteins in nematode-plant interactions.

Authors:  Eric L Davis; Richard S Hussey; Melissa G Mitchum; Thomas J Baum
Journal:  Curr Opin Plant Biol       Date:  2008-05-20       Impact factor: 7.834

10.  Morphological and Molecular Identification of Globodera pallida Associated with Potato in Idaho.

Authors:  A M Skantar; Z A Handoo; L K Carta; D J Chitwood
Journal:  J Nematol       Date:  2007-06       Impact factor: 1.402

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  1 in total

1.  RNA-Seq of Cyst Nematode Infestation of Potato (Solanum tuberosum L.): A Comparative Transcriptome Analysis of Resistant and Susceptible Cultivars.

Authors:  Saranya Chandrasekar; Purushothaman Natarajan; Priyank Hanuman Mhatre; Mahesh Mahajan; Sundararaj Nivitha; Venkatasalam E Palanisamy; Umesh K Reddy; Palanisamy Sundararaj
Journal:  Plants (Basel)       Date:  2022-04-07
  1 in total

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