Literature DB >> 28846052

Association of HTRA1 rs11200638 with age-related macular degeneration (AMD) in Brazilian patients.

Tamires Prates Lana1, Sueli Matilde da Silva Costa1, Galina Ananina1, Fábio Endo Hirata2, Priscila Hae Hyun Rim2, Flávio MacCord Medina2, José Paulo Cabral de Vasconcellos2, Mônica Barbosa de Melo1.   

Abstract

Age-related macular degeneration is a multifactorial disease that can lead to vision impairment in older individuals. Although the etiology of age-related macular degeneration remains unknown, risk factors include age, ethnicity, smoking, hypertension, obesity, and genetic factors. Two main loci have been identified through genome-wide association studies, on chromosomes 1 and 10. Among the variants located at the 10q26 region, rs11200638, located at the HTRA1 gene promoter, has been associated with age-related macular degeneration in several populations and is considered the main polymorphism. We conducted a replication case-control study to analyze the frequency and participation of rs11200638 in the etiology of age-related macular degeneration in a sample of patients and controls from the State of São Paulo, Brazil, through polymerase chain reaction and enzymatic digestion. The frequency of the A allele was 57.60% in patients with age-related macular degeneration and 36.45% in controls (p value < 1e-07), representing a 2.369-fold higher risk factor for the disease. Both the AA and AG genotypes were observed more frequently in the age-related macular degeneration group compared to the control group (p = 1.21e-07 and 0.0357, respectively). No statistically significant results were observed after stratification in dry versus wet types or advanced versus non-advanced forms. To our knowledge, this is the first time the association between rs11200638 and overall age-related macular degeneration has been reported in South America.

Entities:  

Keywords:  10q26; AMD; SNP; complex disease; genetic polymorphism

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Year:  2017        PMID: 28846052     DOI: 10.1080/13816810.2017.1354382

Source DB:  PubMed          Journal:  Ophthalmic Genet        ISSN: 1381-6810            Impact factor:   1.803


  4 in total

1.  Correlation between genetic and environmental risk factors for age-related macular degeneration in Brazilian patients.

Authors:  Priscila H H Rim; José Paulo C de Vasconcellos; Mônica B de Melo; Flavio M C Medina; Daniela P D Sacconi; Tamires P Lana; Fabio E Hirata; Luis A Magna; Antonia P Marques-de-Faria
Journal:  PLoS One       Date:  2022-06-03       Impact factor: 3.752

2.  Associations of TLR4 gene polymorphisms with the risk of age-related macular degeneration in a Chinese Han population.

Authors:  Yu Ling; Fei Xiong
Journal:  Medicine (Baltimore)       Date:  2019-05       Impact factor: 1.817

3.  HTRA1 rs11200638 variant and AMD risk from a comprehensive analysis about 15,316 subjects.

Authors:  Ying Liu; Huipeng Jin; Dong Wei; Wenxiu Li
Journal:  BMC Med Genet       Date:  2020-05-15       Impact factor: 2.103

4.  Association of the HtrA1 rs11200638 Polymorphism with Neovascular Age-Related Macular Degeneration in Indonesia.

Authors:  Supanji Supanji; Ayudha Bahana Ilham Perdamaian; Dewi Fathin Romdhoniyyah; Muhammad Bayu Sasongko; Angela Nurini Agni; Firman Setya Wardhana; Tri Wahyu Widayanti; Muhammad Eko Prayogo; Chio Oka; Masashi Kawaichi
Journal:  Ophthalmol Ther       Date:  2021-11-02
  4 in total

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