| Literature DB >> 28838891 |
Qiu-Ju Gao1, Jia-Xin Xie1, Li-Min Wang1, Qiang Zhou1, Shi-Yong Zhang2.
Abstract
BACKGROUND: The natural outcomes of hepatitis B virus (HBV) and/or hepatitis C virus (HCV) infections vary considerably among individuals The infection may heal naturally, or patients may succumb to chronic liver diseases, including chronic hepatitis, liver cirrhosis and hepatocellular carcinoma. The mechanism is not fully understood.Entities:
Keywords: hepatitis B virus; hepatitis C virus; interaction; single nucleotide polymorphism
Mesh:
Substances:
Year: 2017 PMID: 28838891 PMCID: PMC5577879 DOI: 10.1136/bmjopen-2016-013279
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 2.692
The IL-10-592 and IL-4-589 genotypes and allele distribution of subjects with different alanine aminotransferase (ALT) levels
| Genotype and allele | ALT level | χ2 | p Value | |
| <80 U/L | ≥80 U/L | |||
| IL-10-592 AA | 110 (45.1) | 8 (24.2) | 6.32 | p<0.05 |
| CC | 27 (11.1) | 3 (9.1) | ||
| AC | 107 (43.9) | 22 (66.7) | ||
| A | 327 (67.0) | 38 (57.6) | 2.30 | p>0.05 |
| C | 161 (33.0) | 28 (42.4) | ||
| IL-4-589 CC | 6 (2.5) | 3 (9.1) | 12.46 | p<0.05 |
| CT | 106 (43.4) | 22 (66.7) | ||
| TT | 132 (54.1) | 8 (24.2) | ||
| C | 118 (24.2) | 28 (42.4) | 9.97 | p<0.01 |
| T | 370 (75.8) | 38 (57.6) | ||
The IL-2–330, IFN-γ+874 and IL-10–1082 genotypes and allele distribution of the subjects with different clinical outcomes
| Genotype and allele | Clinical outcome | χ2 |
| ||
| Controls | ASC | CHB/C | |||
| IL-2–330 TT | 22 (29.7) | 54 (44.3) | 23 (40.4) | 13.46 | p<0.05 |
| GG | 19 (25.7) | 14 (11.4) | 6 (10.5) | ||
| TG | 33 (44.6) | 54 (44.3) | 28 (49.1) | ||
| T | 77 (52.0) | 163 (66.8) | 74 (64.9) | 11.69 | p<0.01 |
| G | 71 (48.0) | 81 (33.2) | 40 (35.1) | ||
| IFN-γ+874TT | 8 (10.8) | 14 (11.5) | 5 (8.8) | 14.8 | p<0.05 |
| AA | 14 (18.9) | 48 (39.3) | 26 (45.6) | ||
| TA | 52 (70.3) | 60 (49.2) | 26 (45.6) | ||
| T | 68 (45.9) | 90 (36.9) | 36 (31.6) | 5.68 | p>0.05 |
| A | 80 (54.1) | 154 (63.1) | 78 (68.4) | ||
| IL-10-1082GG | 1 (1.4) | 1 (0.8) | 1 (1.8) | 7.03 | p<0.05 |
| AA | 16 (21.6) | 44 (36.1) | 24 (42.1) | ||
| GA | 57 (77.0) | 77 (63.1) | 32 (56.1) | ||
| G | 59 (39.9) | 79 (32.4) | 34 (29.8) | 5.85 | p>0.05 |
| A | 89 (60.1) | 165 (67.6) | 80 (70.2) | ||
ASC, asymptomatic HBV and/or HCV carriers; HBV, hepatitis B virus; HCV, hepatitis C virus.
Gene–gene interactions of IFN-γ+874, IL-2-330, IL-10-1082, IL-10-592 and IL-4-589 in the clinical outcome of the subjects infected with HBV and HCV
| Clinical | Interaction among genes | Testing | CV consistency |
|
| Abnormal ALT | IL-10-A592C*IL-4-C589T | 0.7112 | 10/10 | <0.01 |
| Clinical outcome | IFN-γ+T874A*IL-2-T330G | 0.6313 | 10/10 | <0.01 |
| IFN-γ+T874A*IL-10-G1082A | 0.6496 | 10/10 | <0.01 | |
| IL-2-T330G*IL-10-G1082A | 0.6182 | 10/10 | <0.01 | |
| IFN-γ+T874A*IL-10-G1082A*IL-2-T330G | 0.5902 | 9/10 | ≤0.01 |
ALT, alanine aminotransferase; CV, cross-validation.
Effect of the interaction of IL-10-592 AC and IL-4-589 CC/CT on serum alanine aminotransferase (ALT) levels of the subjects infected with HBV and/or HCV
| IL-10-592 AC | IL-4-589 CC/CT | ALT<80 U/L | ALT≥80 U/L | p Value | OR (95% CI) |
| − | − | 82 | 5 | − | 1.00 |
| − | + | 55 | 6 | >0.05 | 1.79 (0.52 to 6.15) |
| + | − | 50 | 3 | >0.05 | 0.98 (0.23 to 4.30) |
| + | + | 57 | 19 | <0.01 | 5.47 (1.93 to 15.49) |
Effect of the interaction of IFN-γ+874 AA and IL-2-330TT on the clinical outcome of the subjects infected with HBV/HCV (n)
| IFN-γ+874 AA | IL-2–330 TT | Clinical outcome | ||||||
| Control1 | ASC2 | p Value | OR (95% CI)2vs1 | CHB/C3 | p Value | OR (95% CI)3vs1 | ||
| − | − | 38 | 45 | − | 1.00 | 25 | − | 1.00 |
| + | − | 13 | 23 | >0.05 | 1.49 (0.67 to3.34) | 20 | =0.05 | 2.34 (1.00 to 5.54) |
| − | + | 21 | 30 | >0.05 | 1.21 (0.60 to 2.44) | 21 | >0.05 | 1.52 (0.69 to 3.34) |
| + | + | 2 | 24 | <0.01 | 10.13 (2.25 to 45.68) | 15 | <0.01 | 11.40 (2.40 to 54.22) |
Control; 2ASC; 3CHB/C.ASC, asymptomatic HBV and/or HCV carriers; HBV, hepatitis B virus; HCV, hepatitis C virus.
Effect of the interaction of IFN-γ+874 AA and IL-10-1082 AA on the clinical outcome of the subjects infected with HBV/HCV (n)
| IFN-γ+874 AA | IL-10-1082 AA | Clinical outcome | ||||||
| Control1 | ASC2 | p Value | OR (95% CI)2vs1 | CHB/C3 | p Value | OR (95% CI)3vs1 | ||
| − | − | 49 | 45 | − | 1.00 | 23 | − | 1.00 |
| + | − | 9 | 33 | <0.01 | 3.99 (1.72 to 9.26) | 21 | <0.01 | 4.97 (1.97 to 12.53) |
| − | + | 11 | 29 | <0.01 | 2.87 (1.29 to 6.41) | 23 | <0.01 | 4.46 (1.86 to 10.66) |
| + | + | 5 | 15 | <0.05 | 3.27 (1.10 to 9.72) | 14 | <0.01 | 5.97 (1.92 to 18.56) |
Control; 2ASC; 3CHB/C.ASC, asymptomatic HBV and/or HCV carriers; HBV, hepatitis B virus; HCV, hepatitis C virus.
Effect of the interaction of IL-2-330 TT and IL-10-1082 AA on the clinical outcome of the subjects with HBV/HCV (n)
| IL-2-330 TT | IL-10-1082AA | Clinical outcome | ||||||
| Control1 | ASC2 | p Value | OR (95% CI)2vs1 | CHB/C3 | p Value | OR (95% CI)3vs1 | ||
| − | − | 41 | 47 | − | 1.00 | 26 | − | 1.00 |
| + | − | 17 | 31 | >0.05 | 1.59 (0.77 to 3.28) | 18 | >0.05 | 1.67 (0.73 to 3.81) |
| − | + | 10 | 21 | >0.05 | 1.83 (0.77 to 4.34) | 19 | <0.05 | 3.00 (1.21 to 7.44) |
| + | + | 6 | 23 | <0.05 | 3.34 (1.24 to 9.01) | 18 | <0.01 | 4.73 (1.66 to 13.47) |
Control; 2ASC; 3CHB/C.ASC, asymptomatic HBV and/or HCV carriers; HBV, hepatitis B virus; HCV, hepatitis C virus.
Effect of the interaction of IFN-γ+874 AA, IL-2-330 TT and IL-10-1082 AA genotypes on the clinical outcome of the subjects with HBV/HCV (n)
| IFN-γ +874 AA | IL-2-330 TT | IL-10-1082 AA | Clinical outcome | ||||||
| Control1 | ASC2 | p Value | OR (95% CI)2vs1 | CHB/C3 | p Value | OR (95% CI)3vs1 | |||
| − | − | − | 32 | 30 | − | 1 | 13 | − | 1 |
| − | − | + | 6 | 15 | >0.05 | 2.67 (0.92 to 7.77) | 12 | <0.01 | 4.92 (1.52 to 15.91) |
| + | − | − | 9 | 17 | >0.05 | 2.02 (0.78 to 5.21) | 13 | <0.05 | 3.56 (1.22 to 10.33) |
| − | + | − | 15 | 17 | >0.05 | 1.21 (0.51 to 2.84) | 10 | >0.05 | 1.64 (0.59 to 4.59) |
| + | + | − | 2 | 14 | <0.01 | 7.47 (1.56 to 35.64) | 8 | <0.01 | 9.85 (1.84 to 52.74) |
| − | + | + | 5 | 14 | =0.05 | 2.99 (0.96 to 9.30) | 11 | <0.01 | 5.42 (1.57 to 18.68) |
| + | − | + | 4 | 6 | >0.05 | 1.60 (0.41 to 6.23) | 7 | <0.05 | 4.31 (1.08 to 17.25) |
| + | + | + | 1 | 9 | <0.05 | 9.60 (1.15 to 80.39) | 7 | <0.01 | 17.23 (1.92 to 154.30) |
Control; 2ASC; 3CHB/C.ASC, asymptomatic HBV and/or HCV carriers; HBV, hepatitis B virus; HCV, hepatitis C virus.