Literature DB >> 28826469

Regulation of life span by the gut microbiota in the short-lived African turquoise killifish.

Patrick Smith1, David Willemsen1, Miriam Popkes1, Franziska Metge1, Edson Gandiwa2, Martin Reichard3, Dario Riccardo Valenzano1,4.   

Abstract

Gut bacteria occupy the interface between the organism and the external environment, contributing to homeostasis and disease. Yet, the causal role of the gut microbiota during host aging is largely unexplored. Here, using the African turquoise killifish (Nothobranchius furzeri), a naturally short-lived vertebrate, we show that the gut microbiota plays a key role in modulating vertebrate life span. Recolonizing the gut of middle-age individuals with bacteria from young donors resulted in life span extension and delayed behavioral decline. This intervention prevented the decrease in microbial diversity associated with host aging and maintained a young-like gut bacterial community, characterized by overrepresentation of the key genera Exiguobacterium, Planococcus, Propionigenium and Psychrobacter. Our findings demonstrate that the natural microbial gut community of young individuals can causally induce long-lasting beneficial systemic effects that lead to life span extension in a vertebrate model.

Entities:  

Keywords:  Nothobranchius furzeri; Turquoise killifish; aging; evolutionary biology; genomics; infectious disease; life span; longevity; microbiology; microbiome

Mesh:

Year:  2017        PMID: 28826469      PMCID: PMC5566455          DOI: 10.7554/eLife.27014

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  79 in total

Review 1.  Host-gut microbiota metabolic interactions.

Authors:  Jeremy K Nicholson; Elaine Holmes; James Kinross; Remy Burcelin; Glenn Gibson; Wei Jia; Sven Pettersson
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2.  Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB.

Authors:  T Z DeSantis; P Hugenholtz; N Larsen; M Rojas; E L Brodie; K Keller; T Huber; D Dalevi; P Hu; G L Andersen
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

Review 3.  Inflammatory bowel disease: cause and immunobiology.

Authors:  Daniel C Baumgart; Simon R Carding
Journal:  Lancet       Date:  2007-05-12       Impact factor: 79.321

4.  FastTree 2--approximately maximum-likelihood trees for large alignments.

Authors:  Morgan N Price; Paramvir S Dehal; Adam P Arkin
Journal:  PLoS One       Date:  2010-03-10       Impact factor: 3.240

5.  Mining the Human Gut Microbiota for Immunomodulatory Organisms.

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Journal:  Cell       Date:  2017-02-16       Impact factor: 41.582

6.  Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease.

Authors:  Timothy R Sampson; Justine W Debelius; Taren Thron; Stefan Janssen; Gauri G Shastri; Zehra Esra Ilhan; Collin Challis; Catherine E Schretter; Sandra Rocha; Viviana Gradinaru; Marie-Francoise Chesselet; Ali Keshavarzian; Kathleen M Shannon; Rosa Krajmalnik-Brown; Pernilla Wittung-Stafshede; Rob Knight; Sarkis K Mazmanian
Journal:  Cell       Date:  2016-12-01       Impact factor: 41.582

7.  PGRP-SC2 promotes gut immune homeostasis to limit commensal dysbiosis and extend lifespan.

Authors:  Linlin Guo; Jason Karpac; Susan L Tran; Heinrich Jasper
Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

Review 8.  E. coli as an all-rounder: the thin line between commensalism and pathogenicity.

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Journal:  Curr Top Microbiol Immunol       Date:  2013       Impact factor: 4.291

9.  Metagenomic biomarker discovery and explanation.

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Journal:  Genome Biol       Date:  2011-06-24       Impact factor: 13.583

10.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Authors:  Mark D Robinson; Davis J McCarthy; Gordon K Smyth
Journal:  Bioinformatics       Date:  2009-11-11       Impact factor: 6.937

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  104 in total

1.  Analysis of the gut and gill microbiome of resistant and susceptible lines of rainbow trout (Oncorhynchus mykiss).

Authors:  Ryan M Brown; Gregory D Wiens; Irene Salinas
Journal:  Fish Shellfish Immunol       Date:  2018-12-01       Impact factor: 4.581

Review 2.  'Inside Out'- a dialogue between mitochondria and bacteria.

Authors:  Bing Han; Chih-Chun Janet Lin; Guo Hu; Meng C Wang
Journal:  FEBS J       Date:  2018-11-21       Impact factor: 5.542

Review 3.  A Comprehensive Understanding of Dietary Effects on C. elegans Physiology.

Authors:  Jie-Jun Zhou; Lei Chun; Jian-Feng Liu
Journal:  Curr Med Sci       Date:  2019-10-14

Review 4.  The Gastric and Intestinal Microbiome: Role of Proton Pump Inhibitors.

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Journal:  Curr Gastroenterol Rep       Date:  2017-08

Review 5.  Aging and Rejuvenation of Neural Stem Cells and Their Niches.

Authors:  Paloma Navarro Negredo; Robin W Yeo; Anne Brunet
Journal:  Cell Stem Cell       Date:  2020-07-28       Impact factor: 24.633

Review 6.  The Gut Microbiota and Healthy Aging: A Mini-Review.

Authors:  Sangkyu Kim; S Michal Jazwinski
Journal:  Gerontology       Date:  2018-07-19       Impact factor: 5.140

Review 7.  Functions of the Microbiota for the Physiology of Animal Metaorganisms.

Authors:  Daniela Esser; Janina Lange; Georgios Marinos; Michael Sieber; Lena Best; Daniela Prasse; Jay Bathia; Malte C Rühlemann; Kathrin Boersch; Cornelia Jaspers; Felix Sommer
Journal:  J Innate Immun       Date:  2018-12-19       Impact factor: 7.349

8.  Translational Geroscience: From invertebrate models to companion animal and human interventions.

Authors:  Mitchell B Lee; Matt Kaeberlein
Journal:  Transl Med Aging       Date:  2018-08-17

9.  Intra-species differences in population size shape life history and genome evolution.

Authors:  David Willemsen; Rongfeng Cui; Martin Reichard; Dario Riccardo Valenzano
Journal:  Elife       Date:  2020-09-01       Impact factor: 8.140

10.  Into the wild: microbiome transplant studies need broader ecological reality.

Authors:  Christopher J Greyson-Gaito; Timothy J Bartley; Karl Cottenie; Will M C Jarvis; Amy E M Newman; Mason R Stothart
Journal:  Proc Biol Sci       Date:  2020-02-26       Impact factor: 5.349

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