Literature DB >> 28823826

Instantaneous brain dynamics mapped to a continuous state space.

Jacob C W Billings1, Alessio Medda2, Sadia Shakil3, Xiaohong Shen4, Amrit Kashyap5, Shiyang Chen6, Anzar Abbas1, Xiaodi Zhang6, Maysam Nezafati6, Wen-Ju Pan6, Gordon J Berman7, Shella D Keilholz8.   

Abstract

Measures of whole-brain activity, from techniques such as functional Magnetic Resonance Imaging, provide a means to observe the brain's dynamical operations. However, interpretation of whole-brain dynamics has been stymied by the inherently high-dimensional structure of brain activity. The present research addresses this challenge through a series of scale transformations in the spectral, spatial, and relational domains. Instantaneous multispectral dynamics are first developed from input data via a wavelet filter bank. Voxel-level signals are then projected onto a representative set of spatially independent components. The correlation distance over the instantaneous wavelet-ICA state vectors is a graph that may be embedded onto a lower-dimensional space to assist the interpretation of state-space dynamics. Applying this procedure to a large sample of resting-state and task-active data (acquired through the Human Connectome Project), we segment the empirical state space into a continuum of stimulus-dependent brain states. Upon observing the local neighborhood of brain-states adopted subsequent to each stimulus, we may conclude that resting brain activity includes brain states that are, at times, similar to those adopted during tasks, but that are at other times distinct from task-active brain states. As task-active brain states often populate a local neighborhood, back-projection of segments of the dynamical state space onto the brain's surface reveals the patterns of brain activity that support many experimentally-defined states.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Connectivity dynamics; Dimensionality reduction; Functional connectivity; Multiscale systems; fMRI

Mesh:

Year:  2017        PMID: 28823826      PMCID: PMC5705346          DOI: 10.1016/j.neuroimage.2017.08.042

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  29 in total

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2.  Temporally-independent functional modes of spontaneous brain activity.

Authors:  Stephen M Smith; Karla L Miller; Steen Moeller; Junqian Xu; Edward J Auerbach; Mark W Woolrich; Christian F Beckmann; Mark Jenkinson; Jesper Andersson; Matthew F Glasser; David C Van Essen; David A Feinberg; Essa S Yacoub; Kamil Ugurbil
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3.  Time-resolved resting-state brain networks.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-30       Impact factor: 11.205

Review 4.  Scale-free brain activity: past, present, and future.

Authors:  Biyu J He
Journal:  Trends Cogn Sci       Date:  2014-04-28       Impact factor: 20.229

5.  Movement and mind: a functional imaging study of perception and interpretation of complex intentional movement patterns.

Authors:  F Castelli; F Happé; U Frith; C Frith
Journal:  Neuroimage       Date:  2000-09       Impact factor: 6.556

6.  Evaluation of sliding window correlation performance for characterizing dynamic functional connectivity and brain states.

Authors:  Sadia Shakil; Chin-Hui Lee; Shella Dawn Keilholz
Journal:  Neuroimage       Date:  2016-03-04       Impact factor: 6.556

7.  Function in the human connectome: task-fMRI and individual differences in behavior.

Authors:  Deanna M Barch; Gregory C Burgess; Michael P Harms; Steven E Petersen; Bradley L Schlaggar; Maurizio Corbetta; Matthew F Glasser; Sandra Curtiss; Sachin Dixit; Cindy Feldt; Dan Nolan; Edward Bryant; Tucker Hartley; Owen Footer; James M Bjork; Russ Poldrack; Steve Smith; Heidi Johansen-Berg; Abraham Z Snyder; David C Van Essen
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

8.  Scale-Free and Multifractal Time Dynamics of fMRI Signals during Rest and Task.

Authors:  P Ciuciu; G Varoquaux; P Abry; S Sadaghiani; A Kleinschmidt
Journal:  Front Physiol       Date:  2012-06-15       Impact factor: 4.566

9.  Can sliding-window correlations reveal dynamic functional connectivity in resting-state fMRI?

Authors:  R Hindriks; M H Adhikari; Y Murayama; M Ganzetti; D Mantini; N K Logothetis; G Deco
Journal:  Neuroimage       Date:  2015-11-26       Impact factor: 6.556

10.  Deep learning for neuroimaging: a validation study.

Authors:  Sergey M Plis; Devon R Hjelm; Ruslan Salakhutdinov; Elena A Allen; Henry J Bockholt; Jeffrey D Long; Hans J Johnson; Jane S Paulsen; Jessica A Turner; Vince D Calhoun
Journal:  Front Neurosci       Date:  2014-08-20       Impact factor: 4.677

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  12 in total

1.  The Human Brain Traverses a Common Activation-Pattern State Space Across Task and Rest.

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3.  Active neural coordination of motor behaviors with internal states.

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5.  Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks.

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6.  Voxel-Based State Space Modeling Recovers Task-Related Cognitive States in Naturalistic fMRI Experiments.

Authors:  Tianjiao Zhang; James S Gao; Tolga Çukur; Jack L Gallant
Journal:  Front Neurosci       Date:  2021-05-06       Impact factor: 4.677

7.  Simplicial and topological descriptions of human brain dynamics.

Authors:  Jacob Billings; Manish Saggar; Jaroslav Hlinka; Shella Keilholz; Giovanni Petri
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Review 8.  Measuring behavior across scales.

Authors:  Gordon J Berman
Journal:  BMC Biol       Date:  2018-02-23       Impact factor: 7.431

9.  Disentangling Multispectral Functional Connectivity With Wavelets.

Authors:  Jacob C W Billings; Garth J Thompson; Wen-Ju Pan; Matthew E Magnuson; Alessio Medda; Shella Keilholz
Journal:  Front Neurosci       Date:  2018-11-06       Impact factor: 4.677

10.  Brain network constraints and recurrent neural networks reproduce unique trajectories and state transitions seen over the span of minutes in resting-state fMRI.

Authors:  Amrit Kashyap; Shella Keilholz
Journal:  Netw Neurosci       Date:  2020-05-01
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