Literature DB >> 28816643

Pharmacometabolomics Informs Quantitative Radiomics for Glioblastoma Diagnostic Innovation.

Theodora Katsila1, Minos-Timotheos Matsoukas1, George P Patrinos1,2, Dimitrios Kardamakis3.   

Abstract

Applications of omics systems biology technologies have enormous promise for radiology and diagnostics in surgical fields. In this context, the emerging fields of radiomics (a systems scale approach to radiology using a host of technologies, including omics) and pharmacometabolomics (use of metabolomics for patient and disease stratification and guiding precision medicine) offer much synergy for diagnostic innovation in surgery, particularly in neurosurgery. This synthesis of omics fields and applications is timely because diagnostic accuracy in central nervous system tumors still challenges decision-making. Considering the vast heterogeneity in brain tumors, disease phenotypes, and interindividual variability in surgical and chemotherapy outcomes, we believe that diagnostic accuracy can be markedly improved by quantitative radiomics coupled to pharmacometabolomics and related health information technologies while optimizing economic costs of traditional diagnostics. In this expert review, we present an innovation analysis on a systems-level multi-omics approach toward diagnostic accuracy in central nervous system tumors. For this, we suggest that glioblastomas serve as a useful application paradigm. We performed a literature search on PubMed for articles published in English between 2006 and 2016. We used the search terms "radiomics," "glioblastoma," "biomarkers," "pharmacogenomics," "pharmacometabolomics," "pharmacometabonomics/pharmacometabolomics," "collaborative informatics," and "precision medicine." A list of the top 4 insights we derived from this literature analysis is presented in this study. For example, we found that (i) tumor grading needs to be better refined, (ii) diagnostic precision should be improved, (iii) standardization in radiomics is lacking, and (iv) quantitative radiomics needs to prove clinical implementation. We conclude with an interdisciplinary call to the metabolomics, pharmacy/pharmacology, radiology, and surgery communities that pharmacometabolomics coupled to information technologies (chemoinformatics tools, databases, collaborative systems) can inform quantitative radiomics, thus translating Big Data and information growth to knowledge growth, rational drug development and diagnostics innovation for glioblastomas, and possibly in other brain tumors.

Entities:  

Keywords:  glioblastoma; information technologies; pharmacometabolomics; quantitative radiomics; system diagnostics

Mesh:

Substances:

Year:  2017        PMID: 28816643     DOI: 10.1089/omi.2017.0087

Source DB:  PubMed          Journal:  OMICS        ISSN: 1536-2310


  7 in total

1.  Metabolomics technology and bioinformatics for precision medicine.

Authors:  Rajeev K Azad; Vladimir Shulaev
Journal:  Brief Bioinform       Date:  2019-11-27       Impact factor: 11.622

2.  A 3-miRNA Signature Enables Risk Stratification in Glioblastoma Multiforme Patients with Different Clinical Outcomes.

Authors:  Vivi Bafiti; Sotiris Ouzounis; Constantina Chalikiopoulou; Eftychia Grigorakou; Ioanna Maria Grypari; Gregory Gregoriou; Andreas Theofanopoulos; Vasilios Panagiotopoulos; Evangelia Prodromidi; Dionisis Cavouras; Vasiliki Zolota; Dimitrios Kardamakis; Theodora Katsila
Journal:  Curr Oncol       Date:  2022-06-16       Impact factor: 3.109

Review 3.  Gaps and Opportunities of Artificial Intelligence Applications for Pediatric Oncology in European Research: A Systematic Review of Reviews and a Bibliometric Analysis.

Authors:  Alberto Eugenio Tozzi; Francesco Fabozzi; Megan Eckley; Ileana Croci; Vito Andrea Dell'Anna; Erica Colantonio; Angela Mastronuzzi
Journal:  Front Oncol       Date:  2022-05-31       Impact factor: 5.738

Review 4.  A Spotlight on the Role of Radiomics and Machine-Learning Applications in the Management of Intracranial Meningiomas: A New Perspective in Neuro-Oncology: A Review.

Authors:  Lara Brunasso; Gianluca Ferini; Lapo Bonosi; Roberta Costanzo; Sofia Musso; Umberto E Benigno; Rosa M Gerardi; Giuseppe R Giammalva; Federica Paolini; Giuseppe E Umana; Francesca Graziano; Gianluca Scalia; Carmelo L Sturiale; Rina Di Bonaventura; Domenico G Iacopino; Rosario Maugeri
Journal:  Life (Basel)       Date:  2022-04-14

5.  Radiomics at a Glance: A Few Lessons Learned from Learning Approaches.

Authors:  Enrico Capobianco; Jun Deng
Journal:  Cancers (Basel)       Date:  2020-08-29       Impact factor: 6.575

Review 6.  A New Era of Neuro-Oncology Research Pioneered by Multi-Omics Analysis and Machine Learning.

Authors:  Satoshi Takahashi; Masamichi Takahashi; Shota Tanaka; Shunsaku Takayanagi; Hirokazu Takami; Erika Yamazawa; Shohei Nambu; Mototaka Miyake; Kaishi Satomi; Koichi Ichimura; Yoshitaka Narita; Ryuji Hamamoto
Journal:  Biomolecules       Date:  2021-04-12

7.  Co-Clinical Imaging Resource Program (CIRP): Bridging the Translational Divide to Advance Precision Medicine.

Authors:  Kooresh I Shoghi; Cristian T Badea; Stephanie J Blocker; Thomas L Chenevert; Richard Laforest; Michael T Lewis; Gary D Luker; H Charles Manning; Daniel S Marcus; Yvonne M Mowery; Stephen Pickup; Ann Richmond; Brian D Ross; Anna E Vilgelm; Thomas E Yankeelov; Rong Zhou
Journal:  Tomography       Date:  2020-09
  7 in total

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