Literature DB >> 28811740

Multiple Testing in the Context of Gene Discovery in Sickle Cell Disease Using Genome-Wide Association Studies.

Kevin H M Kuo1,2.   

Abstract

The issue of multiple testing, also termed multiplicity, is ubiquitous in studies where multiple hypotheses are tested simultaneously. Genome-wide association study (GWAS), a type of genetic association study that has gained popularity in the past decade, is most susceptible to the issue of multiple testing. Different methodologies have been employed to address the issue of multiple testing in GWAS. The purpose of the review is to examine the methodologies employed in dealing with multiple testing in the context of gene discovery using GWAS in sickle cell disease complications.

Entities:  

Keywords:  Sickle cell disease; genome-wide association study; multiple testing

Year:  2017        PMID: 28811740      PMCID: PMC5542087          DOI: 10.1177/1178631017721178

Source DB:  PubMed          Journal:  Genomics Insights        ISSN: 1178-6310


  55 in total

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Authors: 
Journal:  Nature       Date:  2005-10-27       Impact factor: 49.962

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Authors:  M H Steinberg
Journal:  Br J Haematol       Date:  2005-05       Impact factor: 6.998

3.  Multiple testing corrections for imputed SNPs.

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5.  The genetics of hemoglobin A2 regulation in sickle cell anemia.

Authors:  Paula J Griffin; Paola Sebastiani; Heather Edward; Clinton T Baldwin; Mark T Gladwin; Victor R Gordeuk; David H K Chui; Martin H Steinberg
Journal:  Am J Hematol       Date:  2014-08-04       Impact factor: 10.047

6.  Inherited haemoglobin disorders: an increasing global health problem.

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7.  The risks and benefits of long-term use of hydroxyurea in sickle cell anemia: A 17.5 year follow-up.

Authors:  Martin H Steinberg; William F McCarthy; Oswaldo Castro; Samir K Ballas; F Danny Armstrong; Wally Smith; Kenneth Ataga; Paul Swerdlow; Abdullah Kutlar; Laura DeCastro; Myron A Waclawiw
Journal:  Am J Hematol       Date:  2010-06       Impact factor: 10.047

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Authors:  Jonathan M Flanagan; Vivien Sheehan; Heidi Linder; Thad A Howard; Yong-Dong Wang; Carolyn C Hoppe; Banu Aygun; Robert J Adams; Geoffrey A Neale; Russell E Ware
Journal:  Blood       Date:  2013-02-19       Impact factor: 22.113

9.  BCL11A is a major HbF quantitative trait locus in three different populations with beta-hemoglobinopathies.

Authors:  Amanda E Sedgewick; Nadia Timofeev; Paola Sebastiani; Jason C C So; Edmond S K Ma; Li Chong Chan; Goonnapa Fucharoen; Supan Fucharoen; Cynara G Barbosa; Badri N Vardarajan; Lindsay A Farrer; Clinton T Baldwin; Martin H Steinberg; David H K Chui
Journal:  Blood Cells Mol Dis       Date:  2008-08-08       Impact factor: 3.039

10.  A genome-wide association study of total bilirubin and cholelithiasis risk in sickle cell anemia.

Authors:  Jacqueline N Milton; Paola Sebastiani; Nadia Solovieff; Stephen W Hartley; Pallav Bhatnagar; Dan E Arking; Daniel A Dworkis; James F Casella; Emily Barron-Casella; Christopher J Bean; W Craig Hooper; Michael R DeBaun; Melanie E Garrett; Karen Soldano; Marilyn J Telen; Allison Ashley-Koch; Mark T Gladwin; Clinton T Baldwin; Martin H Steinberg; Elizabeth S Klings
Journal:  PLoS One       Date:  2012-04-27       Impact factor: 3.240

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2.  Searching for parent-of-origin effects on cardiometabolic traits in imprinted genomic regions.

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Journal:  Eur J Hum Genet       Date:  2020-01-02       Impact factor: 4.246

3.  Association Mapping Based on a Common-Garden Migration Experiment Reveals Candidate Genes for Migration Tendency in Brown Trout.

Authors:  Alexandre Lemopoulos; Silva Uusi-Heikkilä; Pekka Hyvärinen; Nico Alioravainen; Jenni M Prokkola; Chris K Elvidge; Anti Vasemägi; Anssi Vainikka
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4.  Dissecting the Root Phenotypic and Genotypic Variability of the Iowa Mung Bean Diversity Panel.

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5.  Three new genes associated with longevity in the European Bison.

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6.  Genetic associations with clozapine-induced myocarditis in patients with schizophrenia.

Authors:  Paul Lacaze; Kathlyn J Ronaldson; Eunice J Zhang; Ana Alfirevic; Hardik Shah; Leah Newman; Maya Strahl; Melissa Smith; Chad Bousman; Ben Francis; Andrew P Morris; Trevor Wilson; Fernando Rossello; David Powell; Vivien Vasic; Robert Sebra; John J McNeil; Munir Pirmohamed
Journal:  Transl Psychiatry       Date:  2020-01-27       Impact factor: 6.222

  6 in total

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