Literature DB >> 28806587

Elucidation of host-pathogen protein-protein interactions to uncover mechanisms of host cell rewiring.

Charlotte Nicod1, Amir Banaei-Esfahani1, Ben C Collins2.   

Abstract

Infectious diseases are the result of molecular cross-talks between hosts and their pathogens. These cross-talks are in part mediated by host-pathogen protein-protein interactions (HP-PPI). HP-PPI play crucial roles in infections, as they may tilt the balance either in favor of the pathogens' spread or their clearance. The identification of host proteins targeted by viral or bacterial pathogenic proteins necessary for the infection can provide insights into their underlying molecular mechanisms of pathogenicity, and potentially even single out pharmacological intervention targets. Here, we review the available methods to study HP-PPI, with a focus on recent mass spectrometry based methods to decipher bacterial-human infectious diseases and examine their relevance in uncovering host cell rewiring by pathogens.
Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2017        PMID: 28806587      PMCID: PMC5732060          DOI: 10.1016/j.mib.2017.07.005

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  83 in total

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Journal:  Nat Genet       Date:  2016-12-19       Impact factor: 38.330

3.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

4.  Elucidating novel hepatitis C virus-host interactions using combined mass spectrometry and functional genomics approaches.

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Journal:  Mol Cell Proteomics       Date:  2013-10-29       Impact factor: 5.911

5.  HIV-host interactome revealed directly from infected cells.

Authors:  Yang Luo; Erica Y Jacobs; Todd M Greco; Kevin D Mohammed; Tommy Tong; Sarah Keegan; James M Binley; Ileana M Cristea; David Fenyö; Michael P Rout; Brian T Chait; Mark A Muesing
Journal:  Nat Microbiol       Date:  2016-05-23       Impact factor: 17.745

6.  Identification and comparative analysis of hepatitis C virus-host cell protein interactions.

Authors:  Patrick T Dolan; Chaoying Zhang; Sudip Khadka; Vaithilingaraja Arumugaswami; Abbey D Vangeloff; Nicholas S Heaton; Sudhir Sahasrabudhe; Glenn Randall; Ren Sun; Douglas J LaCount
Journal:  Mol Biosyst       Date:  2013-10-18

7.  An integrated approach to elucidate the intra-viral and viral-cellular protein interaction networks of a gamma-herpesvirus.

Authors:  Shaoying Lee; Lukasz Salwinski; Chaoying Zhang; Derrick Chu; Claire Sampankanpanich; Nichole A Reyes; Abbey Vangeloff; Fangfang Xing; Xudong Li; Ting-Ting Wu; Sudhir Sahasrabudhe; Hongyu Deng; Douglas J Lacount; Ren Sun
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Journal:  F1000Res       Date:  2016-04-29

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  24 in total

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Journal:  Mol Cell       Date:  2018-08-16       Impact factor: 17.970

2.  mCSM-PPI2: predicting the effects of mutations on protein-protein interactions.

Authors:  Carlos H M Rodrigues; Yoochan Myung; Douglas E V Pires; David B Ascher
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3.  The Actin Cytoskeleton Mediates Transmission of "Candidatus Liberibacter solanacearum" by the Carrot Psyllid.

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Review 5.  Computational Network Inference for Bacterial Interactomics.

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6.  HMI-PRED: A Web Server for Structural Prediction of Host-Microbe Interactions Based on Interface Mimicry.

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Journal:  J Mol Biol       Date:  2020-02-13       Impact factor: 5.469

Review 7.  Systems biology of host-Candida interactions: understanding how we shape each other.

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Review 8.  Crosslinking mass spectrometry: A link between structural biology and systems biology.

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Review 9.  Proteomic Applications in Antimicrobial Resistance and Clinical Microbiology Studies.

Authors:  Ehsaneh Khodadadi; Elham Zeinalzadeh; Sepehr Taghizadeh; Bahareh Mehramouz; Fadhil S Kamounah; Ehsan Khodadadi; Khudaverdi Ganbarov; Bahman Yousefi; Milad Bastami; Hossein Samadi Kafil
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10.  A Structure-Informed Atlas of Human-Virus Interactions.

Authors:  Gorka Lasso; Sandra V Mayer; Evandro R Winkelmann; Tim Chu; Oliver Elliot; Juan Angel Patino-Galindo; Kernyu Park; Raul Rabadan; Barry Honig; Sagi D Shapira
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